Non-Coding RNA Search

Ss1.1-Pig4-TMW8065J01.3

Sequence:


               
               CCCTTTTTAGTCTTGCCAGGGTTTATCAGTGTTATTAATCATTTCAGAGAATGAATATTT
GGCCTTCTTAATCCTTTATTTTTTAATGTTGATTTTTCATTTCATTGGTTTCTGCTTTTA
GGTTTATTGTCTTCTTGTTTCTTTGGGCTTAATTTACTGTTCCTTTCCTAACTTCTTCAA
CTGAAGAATTCCTAACTTCTTGGAAGCTTAGCTTATTGATTTTCAGCCTTTCTTTTTCTT
TTTTATATATATATATTTAAGGCTATAAATTTCCCTCTGAGCATGCTTTTTAGCCACATT
CCACAAATTTTAATATGTAGCATTCTTATTCAGTTCAAAACATTTTCTAGTTTTCATTGT
GATTTCTTCCAAATGTTATCTGGAGATGTATTTCCTAATTTCCGAATGTATGGTGATTAT
CTAATTATTATTTTTGTTAATGATTTCTAGCTTAATTGCACTGTGGTCAAAGAACATGCT
CCATAGGATTTCAGTTCTTTGAAATTTTTTGAGACTTCAGGACTCAACATAAAGTCTTTT
GTGTGATTATTCAATATGTACTTGAAAAGAATGTGAATTCTGCTATTCTTGGTGCTGGTG
TTCTGTATAGGCCCATTGGGTCAAGTTTCTTATCGTGTACCTCAGGTCTTCTATATATTT
ATTGATTTTTTAATCGTGTTCTATTAGCGACTGAAAAAACAGTATTAAAGTCTCACAAGG
TGATTATAGATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCTTTTTAGTCTTGCCAGGGTTTATCAGTGTTATTAATCATTTCAGAGAATGAATATTT
GGCCTTCTTAATCCTTTATTTTTTAATGTTGATTTTTCATTTCATTGGTTTCTGCTTTTA
GGTTTATTGTCTTCTTGTTTCTTTGGGCTTAATTTACTGTTCCTTTCCTAACTTCTTCAA
CTGAAGAATTCCTAACTTCTTGGAAGCTTAGCTTATTGATTTTCAGCCTTTCTTTTTCTT
TTTTATATATATATATTTAAGGCTATAAATTTCCCTCTGAGCATGCTTTTTAGCCACATT
CCACAAATTTTAATATGTAGCATTCTTATTCAGTTCAAAACATTTTCTAGTTTTCATTGT
GATTTCTTCCAAATGTTATCTGGAGATGTATTTCCTAATTTCCGAATGTATGGTGATTAT
CTAATTATTATTTTTGTTAATGATTTCTAGCTTAATTGCACTGTGGTCAAAGAACATGCT
CCATAGGATTTCAGTTCTTTGAAATTTTTTGAGACTTCAGGACTCAACATAAAGTCTTTT
GTGTGATTATTCAATATGTACTTGAAAAGAATGTGAATTCTGCTATTCTTGGTGCTGGTG
TTCTGTATAGGCCCATTGGGTCAAGTTTCTTATCGTGTACCTCAGGTCTTCTATATATTT
ATTGATTTTTTAATCGTGTTCTATTAGCGACTGAAAAAACAGTATTAAAGTCTCACAAGG
TGATTATAGATT

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               9-718, gnl|bosTau2|chr23 (14263302-14262582)
               

               
               9-718, gnl|canFam2|chr12 (12915762-12916836)
               

               
               9-718, gnl|hg17|chr6 (41220664-41221745)
               

               
               9-718, gnl|Hg17|chr6 (41221130-41221841)
               

               
               9-718, gnl|panTro1|chr5 (41785063-41786144)
               

               
               9-718, gnl|rheMac2|chr4 (40967470-40968560)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-718, gnl|bosTau2|chr23 (14263302-14262582)
               

               
               9-718, gnl|canFam2|chr12 (12915762-12916836)
               

               
               9-718, gnl|hg17|chr6 (41220664-41221745)
               

               
               9-718, gnl|Hg17|chr6 (41221130-41221841)
               

               
               9-718, gnl|panTro1|chr5 (41785063-41786144)
               

               
               9-718, gnl|rheMac2|chr4 (40967470-40968560)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	9-718, gnl\|bosTau2\|chr23 (14263302-14262582)
	9-718, gnl\|canFam2\|chr12 (12915762-12916836)
	9-718, gnl\|hg17\|chr6 (41220664-41221745)
	9-718, gnl\|Hg17\|chr6 (41221130-41221841)
	9-718, gnl\|panTro1\|chr5 (41785063-41786144)
	9-718, gnl\|rheMac2\|chr4 (40967470-40968560)