Ss1.1-Pig4-TMW8065M04.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCGGCAGTGGCAGCAGAGATGGAGGAGGGCGGCCGGGATAAGGCGTCGCTGCAGACTCA GCAGCCCCCAGCGACGTCCCCCGGCGGCGGGGACGAGAAGTCGAGCAGCAAGGAGCGGCG AGATGCCGGGGACAAGGACAAAGAGCAGGAGCTGTCTGAGGAGGACAAACAACTTCAGGA TGAACTGGAGATGCTCGTGGAACGACTTGGGGAGAAGGACACGTCCCTGTACCGACCAGC CCTGGAAGAACTGCGGAGACAGATTCGTTCTTCTACAACTTCCATGACATCAGTACCCAA GCCTCTTAAATTTCTGCGTCCACACTATGGCAAACTGAAGGAGATCTATGAGAACATGGC CCCTGGGGAGAATAAGCGTTTTGCTGCTGACATCATCTCTGTTTTGGCCATGACCATGAG CGGGGAGCGAGAGTGCCTCAAATATCGTCTAGTGGGCTCCCAGGAGGAGTTGGCATCATG GGGTCATGAATATGTCAGACATCTGGCAGGAGAGGTGGCTAAGGAGTGGCAGGAGCTGGA TGATGCGGAGAAGACTCAGCGGGAGCCACTGCTGACCTTGGTAAAGGAGATTGTCCCATA CAACATGGCCCACAATGCAGAACATGAGGCCTGTGACCTGCTCATGGAAATTGAGCAGGT GGATATGCTGGAGAAAGACATTGATGAGAATGCATATGCAAAAGTCTGCCTCTATCTTAC TAGTTGTGTGAATTATGTGCCCGAGCCTGAGAACTCCGCCCTACTACGTTGCGCCTTGGG TGTGTTCCGAAAGTTCAGTCGCTTCCCTGAAGCTCTGAGATTGGCACTGATGCTCAATGA CATGGAGCTGGTAGAAGATATTTTCACCTCCTGCAAGGATGTGGTTGTACAGAAGCAAAT GGCATTCATGCTAGGCCGGCATGGAGTGTTTTTAGAGCTGAGTGAAGATGTGGAGGAGTA TGAGGACCTGACAGAGATCATGTCCAATGTACAGCTCAACAGCAACTTCTTGGCATTAGC TCGGGAGCTGGACATCATGGAGCCCAAGGTGCCTGATGACATCTATAAAACCCACCTAGA GAACAACAGGTTTGGGGGCAGTGGCTCTCAAGTGGACTCTGCCCGTATGAACCTGGCCTC CTCTTTTGTGAACGGCTTCGTGAATGCAGCCTTTGGCCAAGACAAGTTGCTGACTGATGA TGGCAACAAATGGCTTTATAAGAACAAGGACCATGGAATGTTGAGTGCAGCTGCCTCCCT TGGCATGATTCTGCTGTGGGATGTGGATGGTGGCCTTACCCAGATCGATAAGTACCTGTA CTCTTCTGAGGACTATATCAAGTCAGGAGCCCTCCTGGCCTGTGGCATCGTGAACTCTGG TGTCCGAAATGAGTGTGACCCTGCTCTAGCACTGCTCTCAGACTATGTCCTCCACAATAG CAACACTATGAGACTTGGTTCCATCTTTGGGCTTGGCCTGGCCTATGCCGGCTCTAATCG CGAAGATGTTCTAACACTGCTGCTACCTGTGATGGGAGATTCCAAATCTAGTATGGAGGT GGCAGGTGTGACAGCTCTAGCCTGTGGAATGATAGCAGTAGGATCCTGCAATGGAGATGT CACCTCCACTATCCTTCAGACCATCATGGAGAAGTCAGAGACTGAGCTTAAGGACACTTA TGCTCGTTGGCTTCCTCTTGGACTTGGCCTCAACCACCTGGGGAAGGGAGAGGCTATCGA GGCCATCCTGGCTGCGCTAGAGGTTGTGTCAGAACCGTTCCGAAGTTTTGCCAACACACT GGTGGATGTGTGTGCCTATGCAGGCTCTGGGAATGTACTCAAGGTGCAGCAGCTGCTCCA TATTTGCAGTGAACACTTTGACTCCAAGGAAAAGGAGGAAGACAAAGACAAGAAGGAAAA GAAGGACAAGGACAAGAAGGAAGCCCCTGCTGACATGGGAGCACATCAGGGAGTGGCTGT GCTGGGCATTGCCCTTATTGCTATGGGGGAGGAGATTGGTGCAGAGATGGCACTGCGAAC CTTTGGCCACCTGCTGAGGTACGGGGAGCCAACACTCCGAAGGGCTGTGCCTTTAGCACT GGCCTTAATCTCTGTTTCAAATCCACGACTCAACATCCTGGATACCCTGAGCAAATTCTC TCATGATGCTGACCCGGAGGTCTCTTATAACTCAATCTTTGCCATGGGCATGGTGGGCAG TGGTACCAATAATGCCCGTCTGGCTGCAATGCTTCGGCAGTTAGCCCAGTATCATGCCAA GGACCCCAACAACCTCTTCATGGTGCGCTTGGCACAGGGCCTGACACATTTGGGGAAGGG CACACTCACCCTCTGCCCCTACCACAGTGACCGGCAGCTTATGAGTCAAGTGGCTGTGGC GGGGTTGCTCACCGTGCTTGTCTCTTTCCTGGATGTTCGCAACATCATTCTAGGCAAGTC ACACTATGTATTATATGGGCTGGTGGCTGCCATGCAGCCCCGAATGCTGGTCACATTTGA TGAGGAGCTGCGGCCATTGCCAGTGTCTGTCCGTGTGGGCCAGGCAGTAGATGTGGTGGG CCAGGCCGGCAAGCCTAAGACCATCACAGGGTTCCAGACGCACACAACCCCAGTGTTGTT GGCTCATGGGGAGCGGGCAGAATTGGCCACTGAGGAATTTCTTCCCGTCACCCCCATCCT GGAAGGTTTTGTTATCCTTCGGAAGAACCCCAACTATGACCTCTAAGTGGCCACCAAAGA CTCTGAGCTGCAGCTGGTATGTCAGCAGGCCATGCATCCTGCTGCTGCGGGTAGATACTG CTCCAGACCTTTGGGGGAATTGTTACCTCCTGTTCTTTTGTTACTGAATGAGATAAATTT GTTGAATAAAGACCTTTATCCCCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCGGCAGTGGCAGCAGAGATGGAGGAGGGCGGCCGGGATAAGGCGTCGCTGCAGACTCA GCAGCCCCCAGCGACGTCCCCCGGCGGCGGGGACGAGAAGTCGAGCAGCAAGGAGCGGCG AGATGCCGGGGACAAGGACAAAGAGCAGGAGCTGTCTGAGGAGGACAAACAACTTCAGGA TGAACTGGAGATGCTCGTGGAACGACTTGGGGAGAAGGACACGTCCCTGTACCGACCAGC CCTGGAAGAACTGCGGAGACAGATTCGTTCTTCTACAACTTCCATGACATCAGTACCCAA GCCTCTTAAATTTCTGCGTCCACACTATGGCAAACTGAAGGAGATCTATGAGAACATGGC CCCTGGGGAGAATAAGCGTTTTGCTGCTGACATCATCTCTGTTTTGGCCATGACCATGAG CGGGGAGCGAGAGTGCCTCAAATATCGTCTAGTGGGCTCCCAGGAGGAGTTGGCATCATG GGGTCATGAATATGTCAGACATCTGGCAGGAGAGGTGGCTAAGGAGTGGCAGGAGCTGGA TGATGCGGAGAAGACTCAGCGGGAGCCACTGCTGACCTTGGTAAAGGAGATTGTCCCATA CAACATGGCCCACAATGCAGAACATGAGGCCTGTGACCTGCTCATGGAAATTGAGCAGGT GGATATGCTGGAGAAAGACATTGATGAGAATGCATATGCAAAAGTCTGCCTCTATCTTAC TAGTTGTGTGAATTATGTGCCCGAGCCTGAGAACTCCGCCCTACTACGTTGCGCCTTGGG TGTGTTCCGAAAGTTCAGTCGCTTCCCTGAAGCTCTGAGATTGGCACTGATGCTCAATGA CATGGAGCTGGTAGAAGATATTTTCACCTCCTGCAAGGATGTGGTTGTACAGAAGCAAAT GGCATTCATGCTAGGCCGGCATGGAGTGTTTTTAGAGCTGAGTGAAGATGTGGAGGAGTA TGAGGACCTGACAGAGATCATGTCCAATGTACAGCTCAACAGCAACTTCTTGGCATTAGC TCGGGAGCTGGACATCATGGAGCCCAAGGTGCCTGATGACATCTATAAAACCCACCTAGA GAACAACAGGTTTGGGGGCAGTGGCTCTCAAGTGGACTCTGCCCGTATGAACCTGGCCTC CTCTTTTGTGAACGGCTTCGTGAATGCAGCCTTTGGCCAAGACAAGTTGCTGACTGATGA TGGCAACAAATGGCTTTATAAGAACAAGGACCATGGAATGTTGAGTGCAGCTGCCTCCCT TGGCATGATTCTGCTGTGGGATGTGGATGGTGGCCTTACCCAGATCGATAAGTACCTGTA CTCTTCTGAGGACTATATCAAGTCAGGAGCCCTCCTGGCCTGTGGCATCGTGAACTCTGG TGTCCGAAATGAGTGTGACCCTGCTCTAGCACTGCTCTCAGACTATGTCCTCCACAATAG CAACACTATGAGACTTGGTTCCATCTTTGGGCTTGGCCTGGCCTATGCCGGCTCTAATCG CGAAGATGTTCTAACACTGCTGCTACCTGTGATGGGAGATTCCAAATCTAGTATGGAGGT GGCAGGTGTGACAGCTCTAGCCTGTGGAATGATAGCAGTAGGATCCTGCAATGGAGATGT CACCTCCACTATCCTTCAGACCATCATGGAGAAGTCAGAGACTGAGCTTAAGGACACTTA TGCTCGTTGGCTTCCTCTTGGACTTGGCCTCAACCACCTGGGGAAGGGAGAGGCTATCGA GGCCATCCTGGCTGCGCTAGAGGTTGTGTCAGAACCGTTCCGAAGTTTTGCCAACACACT GGTGGATGTGTGTGCCTATGCAGGCTCTGGGAATGTACTCAAGGTGCAGCAGCTGCTCCA TATTTGCAGTGAACACTTTGACTCCAAGGAAAAGGAGGAAGACAAAGACAAGAAGGAAAA GAAGGACAAGGACAAGAAGGAAGCCCCTGCTGACATGGGAGCACATCAGGGAGTGGCTGT GCTGGGCATTGCCCTTATTGCTATGGGGGAGGAGATTGGTGCAGAGATGGCACTGCGAAC CTTTGGCCACCTGCTGAGGTACGGGGAGCCAACACTCCGAAGGGCTGTGCCTTTAGCACT GGCCTTAATCTCTGTTTCAAATCCACGACTCAACATCCTGGATACCCTGAGCAAATTCTC TCATGATGCTGACCCGGAGGTCTCTTATAACTCAATCTTTGCCATGGGCATGGTGGGCAG TGGTACCAATAATGCCCGTCTGGCTGCAATGCTTCGGCAGTTAGCCCAGTATCATGCCAA GGACCCCAACAACCTCTTCATGGTGCGCTTGGCACAGGGCCTGACACATTTGGGGAAGGG CACACTCACCCTCTGCCCCTACCACAGTGACCGGCAGCTTATGAGTCAAGTGGCTGTGGC GGGGTTGCTCACCGTGCTTGTCTCTTTCCTGGATGTTCGCAACATCATTCTAGGCAAGTC ACACTATGTATTATATGGGCTGGTGGCTGCCATGCAGCCCCGAATGCTGGTCACATTTGA TGAGGAGCTGCGGCCATTGCCAGTGTCTGTCCGTGTGGGCCAGGCAGTAGATGTGGTGGG CCAGGCCGGCAAGCCTAAGACCATCACAGGGTTCCAGACGCACACAACCCCAGTGTTGTT GGCTCATGGGGAGCGGGCAGAATTGGCCACTGAGGAATTTCTTCCCGTCACCCCCATCCT GGAAGGTTTTGTTATCCTTCGGAAGAACCCCAACTATGACCTCTAAGTGGCCACCAAAGA CTCTGAGCTGCAGCTGGTATGTCAGCAGGCCATGCATCCTGCTGCTGCGGGTAGATACTG CTCCAGACCTTTGGGGGAATTGTTACCTCCTGTTCTTTTGTTACTGAATGAGATAAATTT GTTGAATAAAGACCTTTATCCCCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 576-2166, - strand, RNAz p=0.949708 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 576-2166, - strand, RNAz p=0.949708 |
| Aligned organism(s): 178 entry(ies) | More info |
| Aligned organism(s): 178 entry(ies) | Help | Less info |
| 1-161, gnl|bosTau2|chr1 (52291077-52290918) | |
| 1-161, gnl|canFam2|chr34 (20187740-20187637) | |
| 1-161, gnl|echTel1|scaffold_295366 (984-884) | |
| 1-161, gnl|fr1|chrUn (120511746-120511668) | |
| 1-161, gnl|galGal2|chrUn (65038843-65038738) | |
| 1-161, gnl|hg17|chr1 (236634582-236634685) | |
| 1-161, gnl|Hg17|chr3 (185499738-185499897) | |
| 1-161, gnl|mm7|chr10 (31028931-31028829) | |
| 1-161, gnl|Mm7|chr16 (20201719-20201878) | |
| 1-161, gnl|monDom2|scaffold_180 (58808-58687) | |
| 1-161, gnl|oryCun1|scaffold_213322 (31074-30971) | |
| 1-161, gnl|panTro1|chr1 (220620425-220620528) | |
| 1-161, gnl|rheMac2|chr1 (216899692-216899597) | |
| 1-161, gnl|rn3|chr11 (82546255-82546358) | |
| 211-376, gnl|bosTau2|chr1 (52289987-52289822) | |
| 211-376, gnl|canFam2|chr34 (20188782-20188619) | |
| 211-376, gnl|canFam2|chr34 (20188615-20188806) | |
| 211-376, gnl|dasNov1|scaffold_33968 (45630-45793) | |
| 211-376, gnl|dasNov1|scaffold_33968 (45797-45606) | |
| 211-376, gnl|echTel1|scaffold_116619 (729-571) | |
| 211-376, gnl|echTel1|scaffold_116619 (564-756) | |
| 211-376, gnl|fr1|chrUn (120512086-120511918) | |
| 211-376, gnl|fr1|chrUn (120511915-120512105) | |
| 211-376, gnl|galGal2|chrUn (65039296-65039133) | |
| 211-376, gnl|galGal2|chrUn (65039129-65039300) | |
| 211-376, gnl|hg17|chr1 (236634360-236634523) | |
| 211-376, gnl|hg17|chr3 (185500768-185500958) | |
| 211-376, gnl|Hg17|chr3 (185500769-185500934) | |
| 211-376, gnl|loxAfr1|scaffold_156459 (769-608) | |
| 211-376, gnl|loxAfr1|scaffold_156459 (604-795) | |
| 211-376, gnl|mm7|chr10 (31029153-31028990) | |
| 211-376, gnl|mm7|chr16 (20202612-20202797) | |
| 211-376, gnl|Mm7|chr16 (20202613-20202778) | |
| 211-376, gnl|monDom2|scaffold_180 (60567-60404) | |
| 211-376, gnl|monDom2|scaffold_180 (60400-60579) | |
| 211-376, gnl|oryCun1|scaffold_213322 (31963-31800) | |
| 211-376, gnl|oryCun1|scaffold_213322 (31796-31987) | |
| 211-376, gnl|panTro1|chr1 (220620203-220620366) | |
| 211-376, gnl|panTro1|chr2 (189457788-189457978) | |
| 211-376, gnl|rheMac2|chr1 (216899913-216899751) | |
| 211-376, gnl|rheMac2|chr2 (102364160-102363970) | |
| 211-376, gnl|rn3|chr11 (82545357-82545520) | |
| 211-376, gnl|rn3|chr11 (82545524-82545339) | |
| 211-376, gnl|tetNig1|chr16 (7127588-7127756) | |
| 211-376, gnl|tetNig1|chr16 (7127760-7127588) | |
| 211-376, gnl|xenTro1|scaffold_244 (306519-306356) | |
| 211-376, gnl|xenTro1|scaffold_244 (306352-306521) | |
| 497-731, gnl|bosTau2|chr1 (52288740-52288506) | |
| 497-731, gnl|Hg17|chr3 (185502335-185502569) | |
| 497-731, gnl|Mm7|chr16 (20204837-20205071) | |
| 883-1030, gnl|bosTau2|chr1 (52287676-52287529) | |
| 883-1030, gnl|canFam2|chr34 (20190686-20190872) | |
| 883-1030, gnl|dasNov1|scaffold_33968 (42619-42421) | |
| 883-1030, gnl|echTel1|scaffold_316254 (34644-34837) | |
| 883-1030, gnl|fr1|chrUn (120513056-120513276) | |
| 883-1030, gnl|galGal2|chrUn (65040326-65040541) | |
| 883-1030, gnl|hg17|chr3 (185503122-185503319) | |
| 883-1030, gnl|Hg17|chr3 (185503169-185503316) | |
| 883-1030, gnl|mm7|chr16 (20205534-20205730) | |
| 883-1030, gnl|Mm7|chr16 (20205580-20205727) | |
| 883-1030, gnl|monDom2|scaffold_180 (62099-62287) | |
| 883-1030, gnl|panTro1|chr2 (189460142-189460339) | |
| 883-1030, gnl|rheMac2|chr2 (102361791-102361594) | |
| 883-1030, gnl|rn3|chr11 (82543360-82543166) | |
| 883-1030, gnl|tetNig1|chr16 (7126635-7126457) | |
| 883-1030, gnl|xenTro1|scaffold_244 (309636-309821) | |
| 1089-1239, gnl|bosTau2|chr1 (52287050-52286900) | |
| 1089-1239, gnl|canFam2|chr34 (20191715-20191570) | |
| 1089-1239, gnl|canFam2|chr34 (20191549-20191684) | |
| 1089-1239, gnl|danRer3|chrNA (83587102-83586958) | |
| 1089-1239, gnl|danRer3|chrNA (83586940-83587071) | |
| 1089-1239, gnl|dasNov1|scaffold_33968 (41770-41915) | |
| 1089-1239, gnl|dasNov1|scaffold_33968 (41931-41801) | |
| 1089-1239, gnl|echTel1|scaffold_316254 (35578-35428) | |
| 1089-1239, gnl|echTel1|scaffold_316254 (35412-35546) | |
| 1089-1239, gnl|fr1|chrUn (120513708-120513564) | |
| 1089-1239, gnl|fr1|chrUn (120513546-120513677) | |
| 1089-1239, gnl|galGal2|chrUn (65041122-65040978) | |
| 1089-1239, gnl|galGal2|chrUn (65040966-65041091) | |
| 1089-1239, gnl|hg17|chr1 (236633506-236633650) | |
| 1089-1239, gnl|hg17|chr3 (185503794-185503925) | |
| 1089-1239, gnl|Hg17|chr3 (185503810-185503960) | |
| 1089-1239, gnl|mm7|chr10 (31030011-31029866) | |
| 1089-1239, gnl|mm7|chr16 (20206551-20206679) | |
| 1089-1239, gnl|Mm7|chr16 (20206564-20206714) | |
| 1089-1239, gnl|monDom2|scaffold_180 (63240-63096) | |
| 1089-1239, gnl|monDom2|scaffold_180 (63077-63209) | |
| 1089-1239, gnl|oryCun1|scaffold_213322 (34536-34391) | |
| 1089-1239, gnl|oryCun1|scaffold_213322 (34373-34505) | |
| 1089-1239, gnl|panTro1|chr1 (220619345-220619490) | |
| 1089-1239, gnl|panTro1|chr2 (189460812-189460943) | |
| 1089-1239, gnl|rheMac2|chr1 (216900773-216900628) | |
| 1089-1239, gnl|rheMac2|chr2 (102361128-102360997) | |
| 1089-1239, gnl|rn3|chr11 (82542403-82542548) | |
| 1089-1239, gnl|rn3|chr11 (82542563-82542434) | |
| 1089-1239, gnl|tetNig1|chr16 (7126020-7126165) | |
| 1089-1239, gnl|tetNig1|chr16 (7126174-7126051) | |
| 1089-1239, gnl|xenTro1|scaffold_244 (311409-311264) | |
| 1089-1239, gnl|xenTro1|scaffold_244 (311247-311378) | |
| 1341-1471, gnl|bosTau2|chr1 (52286454-52286324) | |
| 1341-1471, gnl|canFam2|chr34 (20192308-20192178) | |
| 1341-1471, gnl|canFam2|chr34 (20192155-20192319) | |
| 1341-1471, gnl|danRer3|chrNA (83589756-83589630) | |
| 1341-1471, gnl|danRer3|chrNA (83589612-83589766) | |
| 1341-1471, gnl|dasNov1|scaffold_33968 (41164-41294) | |
| 1341-1471, gnl|dasNov1|scaffold_33968 (41317-41153) | |
| 1341-1471, gnl|echTel1|scaffold_316254 (36145-36019) | |
| 1341-1471, gnl|echTel1|scaffold_316254 (35997-36158) | |
| 1341-1471, gnl|fr1|chrUn (120514154-120514028) | |
| 1341-1471, gnl|fr1|chrUn (120514003-120514170) | |
| 1341-1471, gnl|galGal2|chrUn (65041642-65041515) | |
| 1341-1471, gnl|galGal2|chrUn (65041502-65041653) | |
| 1341-1471, gnl|hg17|chr1 (236633268-236633398) | |
| 1341-1471, gnl|hg17|chr3 (185504413-185504577) | |
| 1341-1471, gnl|Hg17|chr3 (185504435-185504565) | |
| 1341-1471, gnl|loxAfr1|scaffold_156459 (4472-4346) | |
| 1341-1471, gnl|loxAfr1|scaffold_156459 (4321-4485) | |
| 1341-1471, gnl|mm7|chr10 (31030248-31030118) | |
| 1341-1471, gnl|mm7|chr16 (20207479-20207643) | |
| 1341-1471, gnl|Mm7|chr16 (20207501-20207631) | |
| 1341-1471, gnl|monDom2|scaffold_180 (63800-63670) | |
| 1341-1471, gnl|monDom2|scaffold_180 (63647-63810) | |
| 1341-1471, gnl|oryCun1|scaffold_213322 (35810-35682) | |
| 1341-1471, gnl|oryCun1|scaffold_213322 (35664-35820) | |
| 1341-1471, gnl|panTro1|chr1 (220619107-220619237) | |
| 1341-1471, gnl|panTro1|chr2 (189461431-189461595) | |
| 1341-1471, gnl|rheMac2|chr1 (216901001-216900880) | |
| 1341-1471, gnl|rheMac2|chr2 (102360509-102360345) | |
| 1341-1471, gnl|rn3|chr11 (82541513-82541643) | |
| 1341-1471, gnl|rn3|chr11 (82541666-82541502) | |
| 1341-1471, gnl|xenTro1|scaffold_244 (312225-312097) | |
| 1341-1471, gnl|xenTro1|scaffold_244 (312074-312229) | |
| 1557-1738, gnl|bosTau2|chr1 (52284717-52284536) | |
| 1557-1738, gnl|canFam2|chr34 (20193777-20194075) | |
| 1557-1738, gnl|dasNov1|scaffold_33968 (40102-39810) | |
| 1557-1738, gnl|echTel1|scaffold_316254 (37252-37515) | |
| 1557-1738, gnl|fr1|chrUn (120514408-120514659) | |
| 1557-1738, gnl|galGal2|chrUn (65041919-65042173) | |
| 1557-1738, gnl|hg17|chr3 (185506246-185506542) | |
| 1557-1738, gnl|Hg17|chr3 (185506256-185506437) | |
| 1557-1738, gnl|loxAfr1|scaffold_73889 (7720-8004) | |
| 1557-1738, gnl|mm7|chr16 (20209415-20209698) | |
| 1557-1738, gnl|Mm7|chr16 (20209425-20209604) | |
| 1557-1738, gnl|monDom2|scaffold_180 (64397-64684) | |
| 1557-1738, gnl|oryCun1|scaffold_213322 (36968-37259) | |
| 1557-1738, gnl|panTro1|chr2 (189463265-189463561) | |
| 1557-1738, gnl|rheMac2|chr2 (102358656-102358360) | |
| 1557-1738, gnl|rn3|chr11 (82539664-82539386) | |
| 1557-1738, gnl|tetNig1|chr16 (7125636-7125419) | |
| 1557-1738, gnl|xenTro1|scaffold_244 (313200-313487) | |
| 1821-1970, gnl|bosTau2|chr1 (52284164-52284015) | |
| 1821-1970, gnl|Hg17|chr3 (185506837-185506986) | |
| 1821-1970, gnl|Mm7|chr16 (20209975-20210124) | |
| 2048-2225, gnl|bosTau2|chr1 (52283494-52283317) | |
| 2048-2225, gnl|canFam2|chr34 (20195247-20195109) | |
| 2048-2225, gnl|danRer3|chrNA (83597190-83597053) | |
| 2048-2225, gnl|dasNov1|scaffold_33968 (38672-38809) | |
| 2048-2225, gnl|echTel1|scaffold_316254 (38639-38502) | |
| 2048-2225, gnl|fr1|chrUn (120515622-120515485) | |
| 2048-2225, gnl|galGal2|chrUn (65043104-65042966) | |
| 2048-2225, gnl|hg17|chr1 (236632530-236632660) | |
| 2048-2225, gnl|Hg17|chr3 (185507841-185508018) | |
| 2048-2225, gnl|loxAfr1|scaffold_73889 (9168-9031) | |
| 2048-2225, gnl|mm7|chr10 (31031002-31030864) | |
| 2048-2225, gnl|Mm7|chr16 (20211580-20211757) | |
| 2048-2225, gnl|monDom2|scaffold_180 (66531-66394) | |
| 2048-2225, gnl|oryCun1|scaffold_213322 (38366-38228) | |
| 2048-2225, gnl|panTro1|chr1 (220618369-220618499) | |
| 2048-2225, gnl|rheMac2|chr1 (216901768-216901630) | |
| 2048-2225, gnl|rn3|chr11 (82537242-82537380) | |
| 2048-2225, gnl|tetNig1|chr16 (7124466-7124602) | |
| 2048-2225, gnl|xenTro1|scaffold_244 (315235-315035) | |
| 2382-2564, gnl|bosTau2|chr16 (33496135-33496316) | |
| 2382-2564, gnl|Hg17|chr1 (236632372-236632169) | |
| 2382-2564, gnl|Mm7|chr10 (31031158-31031340) | |
| 2577-2918, gnl|bosTau2|chr16 (33496308-33496649) | |
| 2577-2918, gnl|Hg17|chr1 (236632198-236631836) | |
| 2577-2918, gnl|Mm7|chr10 (31031332-31031712) |
| Aligned organism(s): 178 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-161, gnl|bosTau2|chr1 (52291077-52290918) | |
| 1-161, gnl|canFam2|chr34 (20187740-20187637) | |
| 1-161, gnl|echTel1|scaffold_295366 (984-884) | |
| 1-161, gnl|fr1|chrUn (120511746-120511668) | |
| 1-161, gnl|galGal2|chrUn (65038843-65038738) | |
| 1-161, gnl|hg17|chr1 (236634582-236634685) | |
| 1-161, gnl|Hg17|chr3 (185499738-185499897) | |
| 1-161, gnl|mm7|chr10 (31028931-31028829) | |
| 1-161, gnl|Mm7|chr16 (20201719-20201878) | |
| 1-161, gnl|monDom2|scaffold_180 (58808-58687) | |
| 1-161, gnl|oryCun1|scaffold_213322 (31074-30971) | |
| 1-161, gnl|panTro1|chr1 (220620425-220620528) | |
| 1-161, gnl|rheMac2|chr1 (216899692-216899597) | |
| 1-161, gnl|rn3|chr11 (82546255-82546358) | |
| 211-376, gnl|bosTau2|chr1 (52289987-52289822) | |
| 211-376, gnl|canFam2|chr34 (20188782-20188619) | |
| 211-376, gnl|canFam2|chr34 (20188615-20188806) | |
| 211-376, gnl|dasNov1|scaffold_33968 (45630-45793) | |
| 211-376, gnl|dasNov1|scaffold_33968 (45797-45606) | |
| 211-376, gnl|echTel1|scaffold_116619 (729-571) | |
| 211-376, gnl|echTel1|scaffold_116619 (564-756) | |
| 211-376, gnl|fr1|chrUn (120512086-120511918) | |
| 211-376, gnl|fr1|chrUn (120511915-120512105) | |
| 211-376, gnl|galGal2|chrUn (65039296-65039133) | |
| 211-376, gnl|galGal2|chrUn (65039129-65039300) | |
| 211-376, gnl|hg17|chr1 (236634360-236634523) | |
| 211-376, gnl|hg17|chr3 (185500768-185500958) | |
| 211-376, gnl|Hg17|chr3 (185500769-185500934) | |
| 211-376, gnl|loxAfr1|scaffold_156459 (769-608) | |
| 211-376, gnl|loxAfr1|scaffold_156459 (604-795) | |
| 211-376, gnl|mm7|chr10 (31029153-31028990) | |
| 211-376, gnl|mm7|chr16 (20202612-20202797) | |
| 211-376, gnl|Mm7|chr16 (20202613-20202778) | |
| 211-376, gnl|monDom2|scaffold_180 (60567-60404) | |
| 211-376, gnl|monDom2|scaffold_180 (60400-60579) | |
| 211-376, gnl|oryCun1|scaffold_213322 (31963-31800) | |
| 211-376, gnl|oryCun1|scaffold_213322 (31796-31987) | |
| 211-376, gnl|panTro1|chr1 (220620203-220620366) | |
| 211-376, gnl|panTro1|chr2 (189457788-189457978) | |
| 211-376, gnl|rheMac2|chr1 (216899913-216899751) | |
| 211-376, gnl|rheMac2|chr2 (102364160-102363970) | |
| 211-376, gnl|rn3|chr11 (82545357-82545520) | |
| 211-376, gnl|rn3|chr11 (82545524-82545339) | |
| 211-376, gnl|tetNig1|chr16 (7127588-7127756) | |
| 211-376, gnl|tetNig1|chr16 (7127760-7127588) | |
| 211-376, gnl|xenTro1|scaffold_244 (306519-306356) | |
| 211-376, gnl|xenTro1|scaffold_244 (306352-306521) | |
| 497-731, gnl|bosTau2|chr1 (52288740-52288506) | |
| 497-731, gnl|Hg17|chr3 (185502335-185502569) | |
| 497-731, gnl|Mm7|chr16 (20204837-20205071) | |
| 883-1030, gnl|bosTau2|chr1 (52287676-52287529) | |
| 883-1030, gnl|canFam2|chr34 (20190686-20190872) | |
| 883-1030, gnl|dasNov1|scaffold_33968 (42619-42421) | |
| 883-1030, gnl|echTel1|scaffold_316254 (34644-34837) | |
| 883-1030, gnl|fr1|chrUn (120513056-120513276) | |
| 883-1030, gnl|galGal2|chrUn (65040326-65040541) | |
| 883-1030, gnl|hg17|chr3 (185503122-185503319) | |
| 883-1030, gnl|Hg17|chr3 (185503169-185503316) | |
| 883-1030, gnl|mm7|chr16 (20205534-20205730) | |
| 883-1030, gnl|Mm7|chr16 (20205580-20205727) | |
| 883-1030, gnl|monDom2|scaffold_180 (62099-62287) | |
| 883-1030, gnl|panTro1|chr2 (189460142-189460339) | |
| 883-1030, gnl|rheMac2|chr2 (102361791-102361594) | |
| 883-1030, gnl|rn3|chr11 (82543360-82543166) | |
| 883-1030, gnl|tetNig1|chr16 (7126635-7126457) | |
| 883-1030, gnl|xenTro1|scaffold_244 (309636-309821) | |
| 1089-1239, gnl|bosTau2|chr1 (52287050-52286900) | |
| 1089-1239, gnl|canFam2|chr34 (20191715-20191570) | |
| 1089-1239, gnl|canFam2|chr34 (20191549-20191684) | |
| 1089-1239, gnl|danRer3|chrNA (83587102-83586958) | |
| 1089-1239, gnl|danRer3|chrNA (83586940-83587071) | |
| 1089-1239, gnl|dasNov1|scaffold_33968 (41770-41915) | |
| 1089-1239, gnl|dasNov1|scaffold_33968 (41931-41801) | |
| 1089-1239, gnl|echTel1|scaffold_316254 (35578-35428) | |
| 1089-1239, gnl|echTel1|scaffold_316254 (35412-35546) | |
| 1089-1239, gnl|fr1|chrUn (120513708-120513564) | |
| 1089-1239, gnl|fr1|chrUn (120513546-120513677) | |
| 1089-1239, gnl|galGal2|chrUn (65041122-65040978) | |
| 1089-1239, gnl|galGal2|chrUn (65040966-65041091) | |
| 1089-1239, gnl|hg17|chr1 (236633506-236633650) | |
| 1089-1239, gnl|hg17|chr3 (185503794-185503925) | |
| 1089-1239, gnl|Hg17|chr3 (185503810-185503960) | |
| 1089-1239, gnl|mm7|chr10 (31030011-31029866) | |
| 1089-1239, gnl|mm7|chr16 (20206551-20206679) | |
| 1089-1239, gnl|Mm7|chr16 (20206564-20206714) | |
| 1089-1239, gnl|monDom2|scaffold_180 (63240-63096) | |
| 1089-1239, gnl|monDom2|scaffold_180 (63077-63209) | |
| 1089-1239, gnl|oryCun1|scaffold_213322 (34536-34391) | |
| 1089-1239, gnl|oryCun1|scaffold_213322 (34373-34505) | |
| 1089-1239, gnl|panTro1|chr1 (220619345-220619490) | |
| 1089-1239, gnl|panTro1|chr2 (189460812-189460943) | |
| 1089-1239, gnl|rheMac2|chr1 (216900773-216900628) | |
| 1089-1239, gnl|rheMac2|chr2 (102361128-102360997) | |
| 1089-1239, gnl|rn3|chr11 (82542403-82542548) | |
| 1089-1239, gnl|rn3|chr11 (82542563-82542434) | |
| 1089-1239, gnl|tetNig1|chr16 (7126020-7126165) | |
| 1089-1239, gnl|tetNig1|chr16 (7126174-7126051) | |
| 1089-1239, gnl|xenTro1|scaffold_244 (311409-311264) | |
| 1089-1239, gnl|xenTro1|scaffold_244 (311247-311378) | |
| 1341-1471, gnl|bosTau2|chr1 (52286454-52286324) | |
| 1341-1471, gnl|canFam2|chr34 (20192308-20192178) | |
| 1341-1471, gnl|canFam2|chr34 (20192155-20192319) | |
| 1341-1471, gnl|danRer3|chrNA (83589756-83589630) | |
| 1341-1471, gnl|danRer3|chrNA (83589612-83589766) | |
| 1341-1471, gnl|dasNov1|scaffold_33968 (41164-41294) | |
| 1341-1471, gnl|dasNov1|scaffold_33968 (41317-41153) | |
| 1341-1471, gnl|echTel1|scaffold_316254 (36145-36019) | |
| 1341-1471, gnl|echTel1|scaffold_316254 (35997-36158) | |
| 1341-1471, gnl|fr1|chrUn (120514154-120514028) | |
| 1341-1471, gnl|fr1|chrUn (120514003-120514170) | |
| 1341-1471, gnl|galGal2|chrUn (65041642-65041515) | |
| 1341-1471, gnl|galGal2|chrUn (65041502-65041653) | |
| 1341-1471, gnl|hg17|chr1 (236633268-236633398) | |
| 1341-1471, gnl|hg17|chr3 (185504413-185504577) | |
| 1341-1471, gnl|Hg17|chr3 (185504435-185504565) | |
| 1341-1471, gnl|loxAfr1|scaffold_156459 (4472-4346) | |
| 1341-1471, gnl|loxAfr1|scaffold_156459 (4321-4485) | |
| 1341-1471, gnl|mm7|chr10 (31030248-31030118) | |
| 1341-1471, gnl|mm7|chr16 (20207479-20207643) | |
| 1341-1471, gnl|Mm7|chr16 (20207501-20207631) | |
| 1341-1471, gnl|monDom2|scaffold_180 (63800-63670) | |
| 1341-1471, gnl|monDom2|scaffold_180 (63647-63810) | |
| 1341-1471, gnl|oryCun1|scaffold_213322 (35810-35682) | |
| 1341-1471, gnl|oryCun1|scaffold_213322 (35664-35820) | |
| 1341-1471, gnl|panTro1|chr1 (220619107-220619237) | |
| 1341-1471, gnl|panTro1|chr2 (189461431-189461595) | |
| 1341-1471, gnl|rheMac2|chr1 (216901001-216900880) | |
| 1341-1471, gnl|rheMac2|chr2 (102360509-102360345) | |
| 1341-1471, gnl|rn3|chr11 (82541513-82541643) | |
| 1341-1471, gnl|rn3|chr11 (82541666-82541502) | |
| 1341-1471, gnl|xenTro1|scaffold_244 (312225-312097) | |
| 1341-1471, gnl|xenTro1|scaffold_244 (312074-312229) | |
| 1557-1738, gnl|bosTau2|chr1 (52284717-52284536) | |
| 1557-1738, gnl|canFam2|chr34 (20193777-20194075) | |
| 1557-1738, gnl|dasNov1|scaffold_33968 (40102-39810) | |
| 1557-1738, gnl|echTel1|scaffold_316254 (37252-37515) | |
| 1557-1738, gnl|fr1|chrUn (120514408-120514659) | |
| 1557-1738, gnl|galGal2|chrUn (65041919-65042173) | |
| 1557-1738, gnl|hg17|chr3 (185506246-185506542) | |
| 1557-1738, gnl|Hg17|chr3 (185506256-185506437) | |
| 1557-1738, gnl|loxAfr1|scaffold_73889 (7720-8004) | |
| 1557-1738, gnl|mm7|chr16 (20209415-20209698) | |
| 1557-1738, gnl|Mm7|chr16 (20209425-20209604) | |
| 1557-1738, gnl|monDom2|scaffold_180 (64397-64684) | |
| 1557-1738, gnl|oryCun1|scaffold_213322 (36968-37259) | |
| 1557-1738, gnl|panTro1|chr2 (189463265-189463561) | |
| 1557-1738, gnl|rheMac2|chr2 (102358656-102358360) | |
| 1557-1738, gnl|rn3|chr11 (82539664-82539386) | |
| 1557-1738, gnl|tetNig1|chr16 (7125636-7125419) | |
| 1557-1738, gnl|xenTro1|scaffold_244 (313200-313487) | |
| 1821-1970, gnl|bosTau2|chr1 (52284164-52284015) | |
| 1821-1970, gnl|Hg17|chr3 (185506837-185506986) | |
| 1821-1970, gnl|Mm7|chr16 (20209975-20210124) | |
| 2048-2225, gnl|bosTau2|chr1 (52283494-52283317) | |
| 2048-2225, gnl|canFam2|chr34 (20195247-20195109) | |
| 2048-2225, gnl|danRer3|chrNA (83597190-83597053) | |
| 2048-2225, gnl|dasNov1|scaffold_33968 (38672-38809) | |
| 2048-2225, gnl|echTel1|scaffold_316254 (38639-38502) | |
| 2048-2225, gnl|fr1|chrUn (120515622-120515485) | |
| 2048-2225, gnl|galGal2|chrUn (65043104-65042966) | |
| 2048-2225, gnl|hg17|chr1 (236632530-236632660) | |
| 2048-2225, gnl|Hg17|chr3 (185507841-185508018) | |
| 2048-2225, gnl|loxAfr1|scaffold_73889 (9168-9031) | |
| 2048-2225, gnl|mm7|chr10 (31031002-31030864) | |
| 2048-2225, gnl|Mm7|chr16 (20211580-20211757) | |
| 2048-2225, gnl|monDom2|scaffold_180 (66531-66394) | |
| 2048-2225, gnl|oryCun1|scaffold_213322 (38366-38228) | |
| 2048-2225, gnl|panTro1|chr1 (220618369-220618499) | |
| 2048-2225, gnl|rheMac2|chr1 (216901768-216901630) | |
| 2048-2225, gnl|rn3|chr11 (82537242-82537380) | |
| 2048-2225, gnl|tetNig1|chr16 (7124466-7124602) | |
| 2048-2225, gnl|xenTro1|scaffold_244 (315235-315035) | |
| 2382-2564, gnl|bosTau2|chr16 (33496135-33496316) | |
| 2382-2564, gnl|Hg17|chr1 (236632372-236632169) | |
| 2382-2564, gnl|Mm7|chr10 (31031158-31031340) | |
| 2577-2918, gnl|bosTau2|chr16 (33496308-33496649) | |
| 2577-2918, gnl|Hg17|chr1 (236632198-236631836) | |
| 2577-2918, gnl|Mm7|chr10 (31031332-31031712) |
| Expressed library(ies): 34 entry(ies) | More info |
| Expressed library(ies): 34 entry(ies) | Help | Less info |
| col (0.585023) | |
| pro (0.512033) | |
| jej (0.494609) | |
| nms (0.427716) | |
| amn (0.417711) | |
| eep (0.367692) | |
| ton (0.351) | |
| eye (0.341006) | |
| cje (0.330469) | |
| cli (0.305623) | |
| ese (0.253004) | |
| nbm (0.198649) | |
| nlu (0.191681) | |
| fty (0.17584) | |
| ill (0.175593) | |
| fbs (0.175346) | |
| fhi (0.169578) | |
| cki (0.165235) | |
| cag (0.151194) | |
| hyp (0.142837) | |
| pty (0.142714) | |
| lnt (0.142308) | |
| hlv (0.139256) | |
| nca (0.136874) | |
| nmm (0.132802) | |
| cov (0.132153) | |
| cly (0.120642) | |
| pgl (0.118483) | |
| ebs (0.118301) | |
| med (0.116252) | |
| ecc (0.115035) | |
| jca (0.11396) | |
| cty (0.10408) | |
| eje (0.0988338) |
| Expressed library(ies): 34 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| col (0.585023) | |
| pro (0.512033) | |
| jej (0.494609) | |
| nms (0.427716) | |
| amn (0.417711) | |
| eep (0.367692) | |
| ton (0.351) | |
| eye (0.341006) | |
| cje (0.330469) | |
| cli (0.305623) | |
| ese (0.253004) | |
| nbm (0.198649) | |
| nlu (0.191681) | |
| fty (0.17584) | |
| ill (0.175593) | |
| fbs (0.175346) | |
| fhi (0.169578) | |
| cki (0.165235) | |
| cag (0.151194) | |
| hyp (0.142837) | |
| pty (0.142714) | |
| lnt (0.142308) | |
| hlv (0.139256) | |
| nca (0.136874) | |
| nmm (0.132802) | |
| cov (0.132153) | |
| cly (0.120642) | |
| pgl (0.118483) | |
| ebs (0.118301) | |
| med (0.116252) | |
| ecc (0.115035) | |
| jca (0.11396) | |
| cty (0.10408) | |
| eje (0.0988338) |