Non-Coding RNA Search

Ss1.1-Pig4-TMW8066A15.3

Sequence:


               
               GAGACAGTGGATAAGCTTCTGGAGAAAGGGCCACCTGTGGAGTCGACCTGACCTCTTAAG
ACAGAACTCTCCAGAGTCTAGGCAAGCTGCATTCCCAACTGAGTGACCTACTCGAATGTC
CCCTTGATTAGCTCAGGTAATTAAGATCTCATCAAACTCACTCTTCTCTGAGTTTGAAGA
GAGCTTTGGAACCACTTCCCCAATCTCAGAAATTATCTTTACAACAGATCTTAAAATATT
CTAATTATTGTCAGTAGTTATAGCCTAGAAATGAATGTAAATTTTAGGTTTTAATTTAGA
AGTTAATAATTGAACCAATGGAAACAATTTTAAATTCTTAAGCTCAGGTGCAATAATGTT
TGCTATTTATTTATAGAATTATATGGGTACATTTTTCTTTTGGAAAGTGATGCTAAAAGA
GTATAAGAAGATGTGCAAGATAAACTATAAAATGATTTCACTAAAAGTTGAAAGTTATAG
AAGTTGTTGTAGGTGTGAGTATAAGGGGTAGGGGTATTTCTGAAGATAACATTTAGCCAA
GAATTTCCTCAATATAGTTGTTTTGAAGAGATCCAGAATGCTTATTTCTTGTTTAGTTTC
CGTGTTGTCTTATAGATCTAACTAAATGTATTTACCTATGCAAAAGATTTATTAAAGCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGACAGTGGATAAGCTTCTGGAGAAAGGGCCACCTGTGGAGTCGACCTGACCTCTTAAG
ACAGAACTCTCCAGAGTCTAGGCAAGCTGCATTCCCAACTGAGTGACCTACTCGAATGTC
CCCTTGATTAGCTCAGGTAATTAAGATCTCATCAAACTCACTCTTCTCTGAGTTTGAAGA
GAGCTTTGGAACCACTTCCCCAATCTCAGAAATTATCTTTACAACAGATCTTAAAATATT
CTAATTATTGTCAGTAGTTATAGCCTAGAAATGAATGTAAATTTTAGGTTTTAATTTAGA
AGTTAATAATTGAACCAATGGAAACAATTTTAAATTCTTAAGCTCAGGTGCAATAATGTT
TGCTATTTATTTATAGAATTATATGGGTACATTTTTCTTTTGGAAAGTGATGCTAAAAGA
GTATAAGAAGATGTGCAAGATAAACTATAAAATGATTTCACTAAAAGTTGAAAGTTATAG
AAGTTGTTGTAGGTGTGAGTATAAGGGGTAGGGGTATTTCTGAAGATAACATTTAGCCAA
GAATTTCCTCAATATAGTTGTTTTGAAGAGATCCAGAATGCTTATTTCTTGTTTAGTTTC
CGTGTTGTCTTATAGATCTAACTAAATGTATTTACCTATGCAAAAGATTTATTAAAGCAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-659, gnl|bosTau2|chr7 (25487155-25486493)
               

               
               1-659, gnl|Hg17|chr6 (83977567-83976878)
               

               
               1-659, gnl|Mm7|chr9 (86685364-86684743)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-659, gnl|bosTau2|chr7 (25487155-25486493)
               

               
               1-659, gnl|Hg17|chr6 (83977567-83976878)
               

               
               1-659, gnl|Mm7|chr9 (86685364-86684743)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               spc (0.226732)
               

               
               fat (0.147427)
               

               
               sug (0.127291)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spc (0.226732)
               

               
               fat (0.147427)
               

               
               sug (0.127291)

	1-659, gnl\|bosTau2\|chr7 (25487155-25486493)
	1-659, gnl\|Hg17\|chr6 (83977567-83976878)
	1-659, gnl\|Mm7\|chr9 (86685364-86684743)