Ss1.1-Pig4-TMW8066B19.3
|
GAACGGCGCTGAAGTCGACGATTTCTCCTGGGAGCCCCCGACTGAAGCGGAGACGAAGGT
GCTGCAAGCGCGGCGGGAGCGGCAGGATCGCATCTCCCGGCTCATGGGCGACTACCTGCT
GCGTGGTTACCGCATGCTGGGCGAGACGTGCGCGGACTGCGGGACGATCCTCCTCCAAGA
CAAACAGCGGAAAATCTACTGCGTGGCTTGTCAGGAGCTCGATTCAGACGTGGATAAAGA
TAATCCGGCTCTGAATGCCCAGGCTGCCCTCTCCCAAGCTCGGGAGCACCAGCTCGCCTC
TGCTTCGGAGCCCCCGTTAGGCTCTCGGCCAGCCCCTCAGCCCCCAGTCCCCCGTCCAGA
GCACTGTGAGGGAGCTGCAGCAGGGCTCAAGGCAGTCCAGGGGCCGCCCCCTCCTGCTGT
GCCTCCAAATGCTGAAGTTGTGGCCTGCACACGGGAGGCTCTCCTGCAGAAGCTGGCCTG
GGCCTCAGCTGAGCTGGGCTCTAGCACCTCCCTGGAGACGAGCATCCAGCTGTGTAGCCT
TATCCGGGCTTGTGCTGAAGCCCTGCGCAGCTTGCAGCAGCTGCAACCCTAAAAGACCCC
TCCTGAGAAGAATCCTCTAGAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAACGGCGCTGAAGTCGACGATTTCTCCTGGGAGCCCCCGACTGAAGCGGAGACGAAGGT
GCTGCAAGCGCGGCGGGAGCGGCAGGATCGCATCTCCCGGCTCATGGGCGACTACCTGCT
GCGTGGTTACCGCATGCTGGGCGAGACGTGCGCGGACTGCGGGACGATCCTCCTCCAAGA
CAAACAGCGGAAAATCTACTGCGTGGCTTGTCAGGAGCTCGATTCAGACGTGGATAAAGA
TAATCCGGCTCTGAATGCCCAGGCTGCCCTCTCCCAAGCTCGGGAGCACCAGCTCGCCTC
TGCTTCGGAGCCCCCGTTAGGCTCTCGGCCAGCCCCTCAGCCCCCAGTCCCCCGTCCAGA
GCACTGTGAGGGAGCTGCAGCAGGGCTCAAGGCAGTCCAGGGGCCGCCCCCTCCTGCTGT
GCCTCCAAATGCTGAAGTTGTGGCCTGCACACGGGAGGCTCTCCTGCAGAAGCTGGCCTG
GGCCTCAGCTGAGCTGGGCTCTAGCACCTCCCTGGAGACGAGCATCCAGCTGTGTAGCCT
TATCCGGGCTTGTGCTGAAGCCCTGCGCAGCTTGCAGCAGCTGCAACCCTAAAAGACCCC
TCCTGAGAAGAATCCTCTAGAAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
11-163, gnl|bosTau2|chr29 (37880328-37880176) |
|
11-163, gnl|canFam2|chr18 (54661509-54661302) |
|
11-163, gnl|danRer3|chrNA (104825378-104825565) |
|
11-163, gnl|dasNov1|scaffold_98489 (43-222) |
|
11-163, gnl|echTel1|scaffold_314547 (43132-42924) |
|
11-163, gnl|fr1|chrUn (179792835-179792656) |
|
11-163, gnl|hg17|chr11 (65094633-65094836) |
|
11-163, gnl|Hg17|chr11 (65094650-65094802) |
|
11-163, gnl|loxAfr1|scaffold_78633 (1034-1228) |
|
11-163, gnl|mm7|chr19 (5626421-5626230) |
|
11-163, gnl|Mm7|chr19 (5626402-5626250) |
|
11-163, gnl|monDom2|scaffold_107 (3215338-3215145) |
|
11-163, gnl|panTro1|chr9 (66340006-66340209) |
|
11-163, gnl|rheMac2|chr14 (8852539-8852336) |
|
11-163, gnl|rn3|chr1 (208512186-208511994) |
|
11-163, gnl|tetNig1|chr7 (9553557-9553378) |
|
11-163, gnl|xenTro1|scaffold_145 (351942-352138) |
| |
|
248-624, gnl|bosTau2|chr29 (37879577-37879201) |
|
248-624, gnl|Hg17|chr11 (65095437-65095812) |
|
248-624, gnl|Mm7|chr19 (5625519-5625128) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
11-163, gnl|bosTau2|chr29 (37880328-37880176) |
|
11-163, gnl|canFam2|chr18 (54661509-54661302) |
|
11-163, gnl|danRer3|chrNA (104825378-104825565) |
|
11-163, gnl|dasNov1|scaffold_98489 (43-222) |
|
11-163, gnl|echTel1|scaffold_314547 (43132-42924) |
|
11-163, gnl|fr1|chrUn (179792835-179792656) |
|
11-163, gnl|hg17|chr11 (65094633-65094836) |
|
11-163, gnl|Hg17|chr11 (65094650-65094802) |
|
11-163, gnl|loxAfr1|scaffold_78633 (1034-1228) |
|
11-163, gnl|mm7|chr19 (5626421-5626230) |
|
11-163, gnl|Mm7|chr19 (5626402-5626250) |
|
11-163, gnl|monDom2|scaffold_107 (3215338-3215145) |
|
11-163, gnl|panTro1|chr9 (66340006-66340209) |
|
11-163, gnl|rheMac2|chr14 (8852539-8852336) |
|
11-163, gnl|rn3|chr1 (208512186-208511994) |
|
11-163, gnl|tetNig1|chr7 (9553557-9553378) |
|
11-163, gnl|xenTro1|scaffold_145 (351942-352138) |
| |
|
248-624, gnl|bosTau2|chr29 (37879577-37879201) |
|
248-624, gnl|Hg17|chr11 (65095437-65095812) |
|
248-624, gnl|Mm7|chr19 (5625519-5625128) |
|
jca (0.22792) |
|
fbs (0.175346) |
|
cty (0.10408) |
|
jej (0.0989218) |
|
jca (0.22792) |
|
fbs (0.175346) |
|
cty (0.10408) |
|
jej (0.0989218) |
