Ss1.1-Pig4-TMW8066I06.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTTTCTTGAGAGCCTTCAAGATCTCATGCAGGTTATGGAGGGCCTCTTCAAGACGGCGA CAAGGGCCGTTCTCGCAAGTTGTCAGGAAGACGTTGAACTCTGTCACAAGTTCATAGCTC CTGGCCAAAAGGACAGATTAGAACATATGCTAAAACACAACTTTCTAGTCATTTCTTATA CTGAGGCAGTGGAGATCTTAAAGCAAGCATCCGAGAACTTCACCTTCACCCCAGAGTGGG GTGCTGATCTACACACGGAGCATGAAAAGTACCTGGTGAAGCATTGTGGTGACATCCCGG TCTTTGTCATTAATTATCCCTTATCTCTCAAGCCGTTCTACATGAGGGATAACGAAGACG GCCCTCGGCACACAGTTGCTGCTGTTGATCTTCTGGTTCCTGGAGTTGGAGAGCTTTTTG GAGGAAGCCTCAGAGAGGAACGGTATCATTTCTTAGAGCAGCGGTTGGCCAGGCTGGGAC TCCAAGAAGCCTACCAGTGGTATCTGGACCTCCGTCGATTTGGATCTGTACCGCATGGAG GTTTTGGGATGGGATTTGAACGCTACCTGCAGTGCATCTTGGGAATTGACAATATCAAAG ATGTAATCCCTTTTCCAAGATTTACTCATTCGTGTCTTTTATAGCTGGAAGATTGGTTAA GGAAAACCACACCAGCGGAGGTACTGCACATGAACACACACGGGAGAATGCATGTTTGAA CTGCAGAAATGCAGGAGTTTTCAATATGTAATTGTCATGCTGGGAGATAGATGAAAAATA CACATGATCAGGATTTTATTAGAAAGTTGAAGGCATTTCATGAAAAGATGAACTCGCTCA AGAAGAGAGACTTATAGCAGATGGAATCTCAGATCTGCTGTATCAATTAAGAAGAAATGA ACAAATTGAATTAGATGATATTAAAGGTCCTTTCAAACTCGAAGACAGAATGAAAGAGTG TATTTTACTTAGTCTTTAATCAGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTTTCTTGAGAGCCTTCAAGATCTCATGCAGGTTATGGAGGGCCTCTTCAAGACGGCGA CAAGGGCCGTTCTCGCAAGTTGTCAGGAAGACGTTGAACTCTGTCACAAGTTCATAGCTC CTGGCCAAAAGGACAGATTAGAACATATGCTAAAACACAACTTTCTAGTCATTTCTTATA CTGAGGCAGTGGAGATCTTAAAGCAAGCATCCGAGAACTTCACCTTCACCCCAGAGTGGG GTGCTGATCTACACACGGAGCATGAAAAGTACCTGGTGAAGCATTGTGGTGACATCCCGG TCTTTGTCATTAATTATCCCTTATCTCTCAAGCCGTTCTACATGAGGGATAACGAAGACG GCCCTCGGCACACAGTTGCTGCTGTTGATCTTCTGGTTCCTGGAGTTGGAGAGCTTTTTG GAGGAAGCCTCAGAGAGGAACGGTATCATTTCTTAGAGCAGCGGTTGGCCAGGCTGGGAC TCCAAGAAGCCTACCAGTGGTATCTGGACCTCCGTCGATTTGGATCTGTACCGCATGGAG GTTTTGGGATGGGATTTGAACGCTACCTGCAGTGCATCTTGGGAATTGACAATATCAAAG ATGTAATCCCTTTTCCAAGATTTACTCATTCGTGTCTTTTATAGCTGGAAGATTGGTTAA GGAAAACCACACCAGCGGAGGTACTGCACATGAACACACACGGGAGAATGCATGTTTGAA CTGCAGAAATGCAGGAGTTTTCAATATGTAATTGTCATGCTGGGAGATAGATGAAAAATA CACATGATCAGGATTTTATTAGAAAGTTGAAGGCATTTCATGAAAAGATGAACTCGCTCA AGAAGAGAGACTTATAGCAGATGGAATCTCAGATCTGCTGTATCAATTAAGAAGAAATGA ACAAATTGAATTAGATGATATTAAAGGTCCTTTCAAACTCGAAGACAGAATGAAAGAGTG TATTTTACTTAGTCTTTAATCAGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 31-132, gnl|bosTau2|chr29 (13004574-13004473) | |
| 31-132, gnl|canFam2|chr21 (23369955-23369817) | |
| 31-132, gnl|danRer3|chr15 (21591201-21591081) | |
| 31-132, gnl|dasNov1|scaffold_13882 (5957-6094) | |
| 31-132, gnl|echTel1|scaffold_281795 (66442-66304) | |
| 31-132, gnl|hg17|chr11 (77867274-77867414) | |
| 31-132, gnl|Hg17|chr11 (77867379-77867278) | |
| 31-132, gnl|loxAfr1|scaffold_46937 (3380-3519) | |
| 31-132, gnl|mm7|chr7 (93062876-93062740) | |
| 31-132, gnl|Mm7|chr7 (93062769-93062870) | |
| 31-132, gnl|monDom2|scaffold_46 (11445959-11445818) | |
| 31-132, gnl|oryCun1|scaffold_206783 (26665-26529) | |
| 31-132, gnl|panTro1|chr9 (79210202-79210342) | |
| 31-132, gnl|rheMac2|chr14 (76672918-76673058) | |
| 31-132, gnl|rn3|chr1 (154367657-154367521) | |
| 31-132, gnl|tetNig1|chr16 (5674909-5675022) | |
| 235-376, gnl|bosTau2|chr29 (12997209-12997068) | |
| 235-376, gnl|canFam2|chr21 (23382246-23382066) | |
| 235-376, gnl|danRer3|chr15 (21596283-21596112) | |
| 235-376, gnl|dasNov1|scaffold_13882 (874-1055) | |
| 235-376, gnl|echTel1|scaffold_303204 (42263-42438) | |
| 235-376, gnl|fr1|chrUn (142865862-142866039) | |
| 235-376, gnl|hg17|chr11 (77854565-77854746) | |
| 235-376, gnl|Hg17|chr11 (77854709-77854568) | |
| 235-376, gnl|loxAfr1|scaffold_67887 (6824-7005) | |
| 235-376, gnl|mm7|chr7 (93071475-93071310) | |
| 235-376, gnl|Mm7|chr7 (93071330-93071471) | |
| 235-376, gnl|monDom2|scaffold_46 (11451581-11451401) | |
| 235-376, gnl|panTro1|chr9 (79176300-79176481) | |
| 235-376, gnl|rheMac2|chr14 (76660427-76660608) | |
| 235-376, gnl|rn3|chr1 (154377538-154377373) | |
| 235-376, gnl|tetNig1|chr16 (5674365-5674543) | |
| 499-981, gnl|bosTau2|chr29 (12982525-12982068) | |
| 499-981, gnl|Hg17|chr11 (77825509-77825028) | |
| 499-981, gnl|Mm7|chr7 (93094001-93094559) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 31-132, gnl|bosTau2|chr29 (13004574-13004473) | |
| 31-132, gnl|canFam2|chr21 (23369955-23369817) | |
| 31-132, gnl|danRer3|chr15 (21591201-21591081) | |
| 31-132, gnl|dasNov1|scaffold_13882 (5957-6094) | |
| 31-132, gnl|echTel1|scaffold_281795 (66442-66304) | |
| 31-132, gnl|hg17|chr11 (77867274-77867414) | |
| 31-132, gnl|Hg17|chr11 (77867379-77867278) | |
| 31-132, gnl|loxAfr1|scaffold_46937 (3380-3519) | |
| 31-132, gnl|mm7|chr7 (93062876-93062740) | |
| 31-132, gnl|Mm7|chr7 (93062769-93062870) | |
| 31-132, gnl|monDom2|scaffold_46 (11445959-11445818) | |
| 31-132, gnl|oryCun1|scaffold_206783 (26665-26529) | |
| 31-132, gnl|panTro1|chr9 (79210202-79210342) | |
| 31-132, gnl|rheMac2|chr14 (76672918-76673058) | |
| 31-132, gnl|rn3|chr1 (154367657-154367521) | |
| 31-132, gnl|tetNig1|chr16 (5674909-5675022) | |
| 235-376, gnl|bosTau2|chr29 (12997209-12997068) | |
| 235-376, gnl|canFam2|chr21 (23382246-23382066) | |
| 235-376, gnl|danRer3|chr15 (21596283-21596112) | |
| 235-376, gnl|dasNov1|scaffold_13882 (874-1055) | |
| 235-376, gnl|echTel1|scaffold_303204 (42263-42438) | |
| 235-376, gnl|fr1|chrUn (142865862-142866039) | |
| 235-376, gnl|hg17|chr11 (77854565-77854746) | |
| 235-376, gnl|Hg17|chr11 (77854709-77854568) | |
| 235-376, gnl|loxAfr1|scaffold_67887 (6824-7005) | |
| 235-376, gnl|mm7|chr7 (93071475-93071310) | |
| 235-376, gnl|Mm7|chr7 (93071330-93071471) | |
| 235-376, gnl|monDom2|scaffold_46 (11451581-11451401) | |
| 235-376, gnl|panTro1|chr9 (79176300-79176481) | |
| 235-376, gnl|rheMac2|chr14 (76660427-76660608) | |
| 235-376, gnl|rn3|chr1 (154377538-154377373) | |
| 235-376, gnl|tetNig1|chr16 (5674365-5674543) | |
| 499-981, gnl|bosTau2|chr29 (12982525-12982068) | |
| 499-981, gnl|Hg17|chr11 (77825509-77825028) | |
| 499-981, gnl|Mm7|chr7 (93094001-93094559) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| elu (0.385356) | |
| isp (0.150376) | |
| lin (0.145603) | |
| thg (0.126791) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| elu (0.385356) | |
| isp (0.150376) | |
| lin (0.145603) | |
| thg (0.126791) |