Non-Coding RNA Search

Ss1.1-Pig4-TMW8067D22.3

Sequence:


               
               TGGCTCATACCTTAATCAACATCAGAGAATTCATACTGGAGAGAAACCCTATGAATGTAG
TGAATGTGGAAAGGCTTTCCATCAGATCTTATCCCTTAGGCTACACCAGAGAATTCATGC
TGGAGAAAAACCCTATAACTGTAGTCAATGTGGGAACAATTTTAACTGTGCTTCAGCCCT
TAGACGACATCAGAAAATTCATAATAGAGAAGCTCTCTGACTGTGTATAACAAATACAAG
AAAACATTGAGTCACCAGTCAATCCTTATTAAATAAGTATCAGTGAATTTTTCAGTTAGT
AATTCTTTGGATATAGTACATATGGAAAAGCCTTCATTTCATGAGCATCCCTTATTTGAA
ATAGCCTAAGTGGTAGACATCTAGTACTTTTAGATCTCTTCTATGCCCCGTTTGAGACCC
AACTCACCTTCAATGCATATCATTCTGATGAAATTGTTTAATCAGGGAGAGCAGTGGATT
GGTCATAGGCTGGCCAATTATTTCCGTCAATCTAATGATGGATAAGAGATTTACAGATGG
CCCTGTCCTGACCAATAGAGCCCTCGGGGGTCATCGTTATGGGTAGTAAGAAAGGATCAT
CCCCCGTACCAGGAATTGCAGGATTTAAGGATTATGTAGCAGGGTTAAAAACTCACCAGT
AGCCGTTTTGCCACCATATGAAGAAAGCCTTCCCAGGATAAATCCAACACAAAGGAAAAT
GGAGATCAGAGACAGAAATTTGAGGATATTGTTTGATCTTCTGTATCCAGTCATGCCCCA
AATCTGTACCATCTTTTACTTTTTCATTTTTGTGATCCAATAAAAAATTCTTTTTGCTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGCTCATACCTTAATCAACATCAGAGAATTCATACTGGAGAGAAACCCTATGAATGTAG
TGAATGTGGAAAGGCTTTCCATCAGATCTTATCCCTTAGGCTACACCAGAGAATTCATGC
TGGAGAAAAACCCTATAACTGTAGTCAATGTGGGAACAATTTTAACTGTGCTTCAGCCCT
TAGACGACATCAGAAAATTCATAATAGAGAAGCTCTCTGACTGTGTATAACAAATACAAG
AAAACATTGAGTCACCAGTCAATCCTTATTAAATAAGTATCAGTGAATTTTTCAGTTAGT
AATTCTTTGGATATAGTACATATGGAAAAGCCTTCATTTCATGAGCATCCCTTATTTGAA
ATAGCCTAAGTGGTAGACATCTAGTACTTTTAGATCTCTTCTATGCCCCGTTTGAGACCC
AACTCACCTTCAATGCATATCATTCTGATGAAATTGTTTAATCAGGGAGAGCAGTGGATT
GGTCATAGGCTGGCCAATTATTTCCGTCAATCTAATGATGGATAAGAGATTTACAGATGG
CCCTGTCCTGACCAATAGAGCCCTCGGGGGTCATCGTTATGGGTAGTAAGAAAGGATCAT
CCCCCGTACCAGGAATTGCAGGATTTAAGGATTATGTAGCAGGGTTAAAAACTCACCAGT
AGCCGTTTTGCCACCATATGAAGAAAGCCTTCCCAGGATAAATCCAACACAAAGGAAAAT
GGAGATCAGAGACAGAAATTTGAGGATATTGTTTGATCTTCTGTATCCAGTCATGCCCCA
AATCTGTACCATCTTTTACTTTTTCATTTTTGTGATCCAATAAAAAATTCTTTTTGCTTA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               1-835, gnl|bosTau2|chr18 (42674602-42673783)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-835, gnl|bosTau2|chr18 (42674602-42673783)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               mgm (0.360685)
               

               
               tes (0.207814)
               

               
               liv (0.146284)
               

               
               csk (0.140746)
               

               
               ret (0.128733)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgm (0.360685)
               

               
               tes (0.207814)
               

               
               liv (0.146284)
               

               
               csk (0.140746)
               

               
               ret (0.128733)

	mgm (0.360685)
	tes (0.207814)
	liv (0.146284)
	csk (0.140746)
	ret (0.128733)