Non-Coding RNA Search

Ss1.1-Pig4-TMW8067E20.3

Sequence:


               
               GGTGGCAGTGAGAGCCCCTCCTTGGACTTTGGAGCAGCCAGTTCATCTCAAGTTCTGAGC
TGTGCTCTGCTCCTTGCTGGTGCCTTGTGAAGGTCTATTCATTACAGGCCCTGGAAGGTT
ACAATGGTCAAGGCTTAAGTGTGAGGACCCTCTGCACTTTGGACAAAAGGATCCTTTATT
CCAATCTTCCTCAGGGAGACAGGCCACCCTTAGTCCCTTGTCTGTTTTTTGGAGGCCAGT
GGCTTAAATCATAAAATCCATCACTTAGGCTGGATTCCTTTAGGTGAATTTGGAAGATAT
TTTTGAGCCTTGGAAGCTGCAAGGAAATGGACTTGGCAGTTCCTGTCTGGTATTTCCCTC
TTGCCCTGGTACCCGAGTTGCTGGCCTGAGAAGTGGGATTGCTCTCGACCATTCGTGGAT
CAGCTGTGCAGCATCTGTGCCTCAGATTTGGGGAGTCCAGGGCCTTGTTCTCCTGCCTGG
AAGATTTGGAGGACTAGGTATTTCAGAGTGCTTTACTGTCACCCAGATGAACTGCAGGCT
CTCCATCTCCTGCACAGCAAGGCCTGTATGTCACAACTGCCTACACAAGAAACCAACCTG
GTCCAAGGATTAAGAGCGGTTAACTCAGTGGACGTCTCTGAGCCATTGCAGTCTCCCTGC
CAAGGTAAAGCACAAGGTGCTACATACTTTTATCTCTAGGATTTAGGATTATCATTTCTG
TTACACAGTGAAACATGACCTGTGTGGGCGTGAAAGCTGGTTGGCATTGTTTTTAATTTA
GTTTCTGAATGGCTGACTTGATTGTGCTGTGTTGGCAGAATGCCTCTGTACCTCTGCCCC
CTCGCCCCCTTTGGCGAAAATAAAGTGACGGATCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGGCAGTGAGAGCCCCTCCTTGGACTTTGGAGCAGCCAGTTCATCTCAAGTTCTGAGC
TGTGCTCTGCTCCTTGCTGGTGCCTTGTGAAGGTCTATTCATTACAGGCCCTGGAAGGTT
ACAATGGTCAAGGCTTAAGTGTGAGGACCCTCTGCACTTTGGACAAAAGGATCCTTTATT
CCAATCTTCCTCAGGGAGACAGGCCACCCTTAGTCCCTTGTCTGTTTTTTGGAGGCCAGT
GGCTTAAATCATAAAATCCATCACTTAGGCTGGATTCCTTTAGGTGAATTTGGAAGATAT
TTTTGAGCCTTGGAAGCTGCAAGGAAATGGACTTGGCAGTTCCTGTCTGGTATTTCCCTC
TTGCCCTGGTACCCGAGTTGCTGGCCTGAGAAGTGGGATTGCTCTCGACCATTCGTGGAT
CAGCTGTGCAGCATCTGTGCCTCAGATTTGGGGAGTCCAGGGCCTTGTTCTCCTGCCTGG
AAGATTTGGAGGACTAGGTATTTCAGAGTGCTTTACTGTCACCCAGATGAACTGCAGGCT
CTCCATCTCCTGCACAGCAAGGCCTGTATGTCACAACTGCCTACACAAGAAACCAACCTG
GTCCAAGGATTAAGAGCGGTTAACTCAGTGGACGTCTCTGAGCCATTGCAGTCTCCCTGC
CAAGGTAAAGCACAAGGTGCTACATACTTTTATCTCTAGGATTTAGGATTATCATTTCTG
TTACACAGTGAAACATGACCTGTGTGGGCGTGAAAGCTGGTTGGCATTGTTTTTAATTTA
GTTTCTGAATGGCTGACTTGATTGTGCTGTGTTGGCAGAATGCCTCTGTACCTCTGCCCC
CTCGCCCCCTTTGGCGAAAATAAAGTGACGGATCTT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-744, gnl|bosTau2|chr22 (12240662-12241410)
               

               
               1-744, gnl|Hg17|chr3 (10296988-10297758)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-744, gnl|bosTau2|chr22 (12240662-12241410)
               

               
               1-744, gnl|Hg17|chr3 (10296988-10297758)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               fty (0.17584)
               

               
               nje (0.16592)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)
               

               
               nje (0.16592)

	1-744, gnl\|bosTau2\|chr22 (12240662-12241410)
	1-744, gnl\|Hg17\|chr3 (10296988-10297758)