Non-Coding RNA Search

Ss1.1-Pig4-TMW8067K17.3

Sequence:


               
               TCTCCATGCCAACAGAACAGGGTAAACATGCTGAAAAATCTAATGTTCTAAACAGATTTC
CAAATAGGAAGAACAAAAACAAGTTAAAGCACTTTCAATTTTTTTTAAAAAAAAAAGGTT
TATAGCTTTGTTGTTTTATTTTTCCCATTTCACAAATATCCACTTCCTAAGAAAGGTTTC
AATAATATGAACACTTTCTTTTTGGGGAAAATATCTATTTGGTGTTTGACACATCAGTAG
GTACTTTAAAGACCTGAATTTTATAGTAGCTTTAGGAATTATATTTTATAAAAATCAGTT
ATGACTTTATATTTCCAGACAATAGAGAGGTCAGAACATGATGCTCTTATGCCCCTGCTT
GCTTTTCCTGCTTTCTCATCCTGTATCCCTCCCCTTGCGGGTTTCCAGGGCTTTGAGCTT
GATCTTTCGAGAGTTTTATTCTATTAAATTTTTGCTATATCTTCTGATTTTCCTAAAAAG
CTTTAGAATGGTTTCTATTCCCTTTGTATCACTGCATTGTTCCATATCATCTCCAGTTTG
CTTGTGTCTGGATGGAAAAACGGAAGCAGAGGCTTCCACTAGTCACATTGACCAGTCCCA
GTGCAACGGGTTTGTCTGAAAATGCTGGAAAGTCTGGTGCTTGGAGAGGGTGCCATTGTC
TCTTGTACATAAGGTCATGACGTGTCTATGTCAAAAGTTCTTATATATTTCTTTTATAAG
CTGAAAGAAGGTCTATTTTTATGTTTTTAGGTCTATGAATGGAACGTTGTAAATGCCTGT
CAAACAATAAAAAATACTGAAAAGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTCCATGCCAACAGAACAGGGTAAACATGCTGAAAAATCTAATGTTCTAAACAGATTTC
CAAATAGGAAGAACAAAAACAAGTTAAAGCACTTTCAATTTTTTTTAAAAAAAAAAGGTT
TATAGCTTTGTTGTTTTATTTTTCCCATTTCACAAATATCCACTTCCTAAGAAAGGTTTC
AATAATATGAACACTTTCTTTTTGGGGAAAATATCTATTTGGTGTTTGACACATCAGTAG
GTACTTTAAAGACCTGAATTTTATAGTAGCTTTAGGAATTATATTTTATAAAAATCAGTT
ATGACTTTATATTTCCAGACAATAGAGAGGTCAGAACATGATGCTCTTATGCCCCTGCTT
GCTTTTCCTGCTTTCTCATCCTGTATCCCTCCCCTTGCGGGTTTCCAGGGCTTTGAGCTT
GATCTTTCGAGAGTTTTATTCTATTAAATTTTTGCTATATCTTCTGATTTTCCTAAAAAG
CTTTAGAATGGTTTCTATTCCCTTTGTATCACTGCATTGTTCCATATCATCTCCAGTTTG
CTTGTGTCTGGATGGAAAAACGGAAGCAGAGGCTTCCACTAGTCACATTGACCAGTCCCA
GTGCAACGGGTTTGTCTGAAAATGCTGGAAAGTCTGGTGCTTGGAGAGGGTGCCATTGTC
TCTTGTACATAAGGTCATGACGTGTCTATGTCAAAAGTTCTTATATATTTCTTTTATAAG
CTGAAAGAAGGTCTATTTTTATGTTTTTAGGTCTATGAATGGAACGTTGTAAATGCCTGT
CAAACAATAAAAAATACTGAAAAGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-806, gnl|bosTau2|chr1 (3953110-3953917)
               

               
               1-806, gnl|Hg17|chr21 (31413410-31412603)
               

               
               1-806, gnl|Mm7|chr16 (89837885-89837038)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-806, gnl|bosTau2|chr1 (3953110-3953917)
               

               
               1-806, gnl|Hg17|chr21 (31413410-31412603)
               

               
               1-806, gnl|Mm7|chr16 (89837885-89837038)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               thg (0.253582)
               

               
               cbe (0.239234)
               

               
               csk (0.140746)
               

               
               ecc (0.115035)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.253582)
               

               
               cbe (0.239234)
               

               
               csk (0.140746)
               

               
               ecc (0.115035)

	1-806, gnl\|bosTau2\|chr1 (3953110-3953917)
	1-806, gnl\|Hg17\|chr21 (31413410-31412603)
	1-806, gnl\|Mm7\|chr16 (89837885-89837038)