Ss1.1-Pig4-TMW8067M06.3
|
TTTACAGAAACATCTTTGTGCAGAGAAGAACCCGAAAGGAGGTCTCATTTAGTTTTTTTA
AAGTTTATTTTTATAATGGTCAGAGGGGGAAAATACATTGGTATCTAATTAAAGTGTAGA
GCAATAAAACCCACTGGATTAACAAGCTCTTGGTTTGTCATCAGGATTATAATTCACATA
ATAACCCTAGAAGATTTTGAAATAAGAAAATACATAGTGTTTGGACCTCAGGAAAAATTT
AAAAAGGGGAAAATACCGTGTTGCGGAAGGATTTTGCAGTCCTTTGTCAGTAATGTCCAT
TGATTAGGTCGATGCATTCAGATAACTCATAATCCTCATTTGTTTTCTTAATGAAGTATC
CAGTGTAGAAGCTCCTTCCCTTGGCTTTCTGCGATATATCTGAATAAGCCCCACCATCCT
TCCTTGAAACGGACCTCTTCGTTTATAAAAGAAATTAGACAGGCTAAAGTATGCTCTTAG
GGAAAGAAATTAAGGCGTTCCCTTGTGCAGCTGGTTAAGGATCTGGCACTGTTACTGTGG
CGGTTCAGATTGATGCTGTGGTTCAGGTTGGATCCCTGGCCTGGGAACTTCTACTTTCAC
ATGCCGCGAGTGCGGCCAAAAAAAGGAAGAAAATAAAAGAAATTTACTTTCAGCCTTTTC
ACTATAGCAGATAGCCACATTTCCTTTTCCTTCTTTGTAAGATGGGATTACTACTGGCCC
TACCTCATAAGGGTATTATGTAAGAGCTAATTTGTATCTGTTTCCAATCATGAAGTGCAC
AGGATCATAGATGATAGAGTATTTATAACTTTTATTAGATGCTTAAAGTTCAATTAAGTA
ATCTTGATGCAAAAGATAAAAGCATACACTTAAACCATAAGAATTTTCCTATTTTTAAAC
AAGGCAGTTTTGTAGTCTTTTAAGATTAAATACAACTGCTCTTGTTTCGTTTTAAACTGA
GGCTTTGGAATATTTTGTGTGTTTAGATAAACCTCTAGGAGTTCAGAAAAGGTTGAAATA
TGTTTTCTAACTAAATGCAGTGCACATTCCTGGATCAATTTTCAAAGACGGTCAAAACCT
GCTGTGTTAAATAATAACATGCTGTTTTTCCTCAGATTTGTTGATGATGTAAATAAAATG
TGTACATATATTAGTAAATGTTAATATTCATGCATTTTAAGTTAAGGTTATAAAATTTGT
CACAATGTGATTTTTTTTATTCAAGTGACAAAAAGATGTGTGCAGCTATTTTGAATATTG
GTTTATAAACAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTTACAGAAACATCTTTGTGCAGAGAAGAACCCGAAAGGAGGTCTCATTTAGTTTTTTTA
AAGTTTATTTTTATAATGGTCAGAGGGGGAAAATACATTGGTATCTAATTAAAGTGTAGA
GCAATAAAACCCACTGGATTAACAAGCTCTTGGTTTGTCATCAGGATTATAATTCACATA
ATAACCCTAGAAGATTTTGAAATAAGAAAATACATAGTGTTTGGACCTCAGGAAAAATTT
AAAAAGGGGAAAATACCGTGTTGCGGAAGGATTTTGCAGTCCTTTGTCAGTAATGTCCAT
TGATTAGGTCGATGCATTCAGATAACTCATAATCCTCATTTGTTTTCTTAATGAAGTATC
CAGTGTAGAAGCTCCTTCCCTTGGCTTTCTGCGATATATCTGAATAAGCCCCACCATCCT
TCCTTGAAACGGACCTCTTCGTTTATAAAAGAAATTAGACAGGCTAAAGTATGCTCTTAG
GGAAAGAAATTAAGGCGTTCCCTTGTGCAGCTGGTTAAGGATCTGGCACTGTTACTGTGG
CGGTTCAGATTGATGCTGTGGTTCAGGTTGGATCCCTGGCCTGGGAACTTCTACTTTCAC
ATGCCGCGAGTGCGGCCAAAAAAAGGAAGAAAATAAAAGAAATTTACTTTCAGCCTTTTC
ACTATAGCAGATAGCCACATTTCCTTTTCCTTCTTTGTAAGATGGGATTACTACTGGCCC
TACCTCATAAGGGTATTATGTAAGAGCTAATTTGTATCTGTTTCCAATCATGAAGTGCAC
AGGATCATAGATGATAGAGTATTTATAACTTTTATTAGATGCTTAAAGTTCAATTAAGTA
ATCTTGATGCAAAAGATAAAAGCATACACTTAAACCATAAGAATTTTCCTATTTTTAAAC
AAGGCAGTTTTGTAGTCTTTTAAGATTAAATACAACTGCTCTTGTTTCGTTTTAAACTGA
GGCTTTGGAATATTTTGTGTGTTTAGATAAACCTCTAGGAGTTCAGAAAAGGTTGAAATA
TGTTTTCTAACTAAATGCAGTGCACATTCCTGGATCAATTTTCAAAGACGGTCAAAACCT
GCTGTGTTAAATAATAACATGCTGTTTTTCCTCAGATTTGTTGATGATGTAAATAAAATG
TGTACATATATTAGTAAATGTTAATATTCATGCATTTTAAGTTAAGGTTATAAAATTTGT
CACAATGTGATTTTTTTTATTCAAGTGACAAAAAGATGTGTGCAGCTATTTTGAATATTG
GTTTATAAACAT
|
|
1-467, gnl|bosTau2|chr19 (5528581-5529045) |
|
1-467, gnl|Hg17|chr17 (57298976-57298228) |
|
1-467, gnl|Mm7|chr11 (86281716-86281270) |
| |
|
636-1272, gnl|bosTau2|chr19 (5529067-5529713) |
|
636-1272, gnl|canFam2|chr9 (38124410-38123715) |
|
636-1272, gnl|dasNov1|scaffold_125093 (4828-4139) |
|
636-1272, gnl|hg17|chr17 (57297493-57298185) |
|
636-1272, gnl|Hg17|chr17 (57298206-57297531) |
|
636-1272, gnl|mm7|chr11 (86280573-86281262) |
|
636-1272, gnl|Mm7|chr11 (86281245-86280607) |
|
636-1272, gnl|monDom2|scaffold_56 (2098422-2099090) |
|
636-1272, gnl|oryCun1|scaffold_204370 (8026-7327) |
|
636-1272, gnl|panTro1|chr19_random (48186426-48187121) |
|
636-1272, gnl|rheMac2|chr16 (44619028-44618334) |
|
636-1272, gnl|rn3|chr10 (74452207-74452907) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-467, gnl|bosTau2|chr19 (5528581-5529045) |
|
1-467, gnl|Hg17|chr17 (57298976-57298228) |
|
1-467, gnl|Mm7|chr11 (86281716-86281270) |
| |
|
636-1272, gnl|bosTau2|chr19 (5529067-5529713) |
|
636-1272, gnl|canFam2|chr9 (38124410-38123715) |
|
636-1272, gnl|dasNov1|scaffold_125093 (4828-4139) |
|
636-1272, gnl|hg17|chr17 (57297493-57298185) |
|
636-1272, gnl|Hg17|chr17 (57298206-57297531) |
|
636-1272, gnl|mm7|chr11 (86280573-86281262) |
|
636-1272, gnl|Mm7|chr11 (86281245-86280607) |
|
636-1272, gnl|monDom2|scaffold_56 (2098422-2099090) |
|
636-1272, gnl|oryCun1|scaffold_204370 (8026-7327) |
|
636-1272, gnl|panTro1|chr19_random (48186426-48187121) |
|
636-1272, gnl|rheMac2|chr16 (44619028-44618334) |
|
636-1272, gnl|rn3|chr10 (74452207-74452907) |
|
ste (0.270416) |
|
kid (0.259471) |
|
cbl (0.229595) |
|
mga (0.160205) |
|
fat (0.147427) |
|
lin (0.145603) |
|
hyp (0.142837) |
|
che (0.136314) |
|
ret (0.128733) |
|
bla (0.124347) |
|
tra (0.123092) |
|
ste (0.270416) |
|
kid (0.259471) |
|
cbl (0.229595) |
|
mga (0.160205) |
|
fat (0.147427) |
|
lin (0.145603) |
|
hyp (0.142837) |
|
che (0.136314) |
|
ret (0.128733) |
|
bla (0.124347) |
|
tra (0.123092) |
