Non-Coding RNA Search

Ss1.1-Pig4-TMW8068I09.3

Sequence:


               
               TTTCAACTCAGAAACGGACAGCTTCAAGCTGGCATATGGAGGACACCAGTATCACGCCAG
CTGTGCCAACTTCTGGATCAACTGCGTTGAACCAAAACCTCCTGGCCTCATCCTGCCTGA
TTTGCTCTGAAAGCTCCTCTGTGAAGTACCAGCCGGTTGTTTTGTGTTTTTTCCGTCACG
CCCCTTGGGGTGACAGGGACCAATAGAATTCAAGTACTGCGGAGTCCCCCCCCATCCGTC
TACCTGAAGAAAACCTCCCAGTGTGGGGGGACATGCTTGGAAGTTCCTAGTTTTCCCACA
GACGACCTTTGTCCCCAAGCTCCCAAAGCCAGTCTTTGGGGTTTGAGGTAAAATTGCCCT
GCTCACTGCATGTGGCCCTGGAAGTTTGCTGACTTATCTCTAGTTCTCTTCAGATGTTTA
AAAAGATGGACCATGATTTTCTCTAAGGAAGCATTTGCTGCTGTGGTATGGAAACTGAAG
AATTGACCTTGAAAGAAGAATAAGTTATTGCTGTAGGACTGGAATTGGCAAGAATGTTTT
GAGCCAGTTTTTGTGTGTTATCTAGAACACTCACTGTCCTGTGAAGTCGAATGCATTTGT
CCACGTTTAGTTTGTTAATAATGCAAATGAATAAAAAGGGAGAAATCGGGAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCAACTCAGAAACGGACAGCTTCAAGCTGGCATATGGAGGACACCAGTATCACGCCAG
CTGTGCCAACTTCTGGATCAACTGCGTTGAACCAAAACCTCCTGGCCTCATCCTGCCTGA
TTTGCTCTGAAAGCTCCTCTGTGAAGTACCAGCCGGTTGTTTTGTGTTTTTTCCGTCACG
CCCCTTGGGGTGACAGGGACCAATAGAATTCAAGTACTGCGGAGTCCCCCCCCATCCGTC
TACCTGAAGAAAACCTCCCAGTGTGGGGGGACATGCTTGGAAGTTCCTAGTTTTCCCACA
GACGACCTTTGTCCCCAAGCTCCCAAAGCCAGTCTTTGGGGTTTGAGGTAAAATTGCCCT
GCTCACTGCATGTGGCCCTGGAAGTTTGCTGACTTATCTCTAGTTCTCTTCAGATGTTTA
AAAAGATGGACCATGATTTTCTCTAAGGAAGCATTTGCTGCTGTGGTATGGAAACTGAAG
AATTGACCTTGAAAGAAGAATAAGTTATTGCTGTAGGACTGGAATTGGCAAGAATGTTTT
GAGCCAGTTTTTGTGTGTTATCTAGAACACTCACTGTCCTGTGAAGTCGAATGCATTTGT
CCACGTTTAGTTTGTTAATAATGCAAATGAATAAAAAGGGAGAAATCGGGAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-656, gnl|bosTau2|chr19 (7057522-7058190)
               

               
               2-656, gnl|Hg17|chr17 (32953284-32952677)
               

               
               2-656, gnl|Mm7|chr11 (84110708-84111486)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-656, gnl|bosTau2|chr19 (7057522-7058190)
               

               
               2-656, gnl|Hg17|chr17 (32953284-32952677)
               

               
               2-656, gnl|Mm7|chr11 (84110708-84111486)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fat (0.147427)
               

               
               nca (0.136874)
               

               
               che (0.136314)
               

               
               pgl (0.118483)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)
               

               
               nca (0.136874)
               

               
               che (0.136314)
               

               
               pgl (0.118483)

	2-656, gnl\|bosTau2\|chr19 (7057522-7058190)
	2-656, gnl\|Hg17\|chr17 (32953284-32952677)
	2-656, gnl\|Mm7\|chr11 (84110708-84111486)