Non-Coding RNA Search

Ss1.1-Pig4-TMW8068J22.3

Sequence:


               
               GAAGTGAGCAATGTAGTTCCACAAATTAAAAAAATGTTATACATCTGTGAAACACCCAAA
TCTGAGCCACAACAGGAGCTCCCACCTCTACCTTTTTCTATTTGCCTTCAGGGACCTACT
ACATTAAAGAGGAAAAAAAAAAAAAAAAAAAACCTAAGTTTTCCTCTTGTATGAACACTT
CCTAATTTCAGTACAGGTATGCCTCACAGATATTGCAGGTTCTATTCCAGACCATTGCAA
TAAAGTAAATATTACAATAAAGCAACTCATGAATTTTTTGGTTTTGCAGTGCATACATAT
GTTTACACTATACTATAGTCTATCAAGTGTGCAAAGCAATGTAGCTAAAAGCAATGTATG
ACTTAATTTAAAAATACTTTAGCTAAAAAATGCTAAACATCATCTGAGACTTTAGCAAGT
CATAATCTTTTAAAATAGTAATATCAGAGATCACTGATCAAAGATCACCATAACAAATAC
ACTAATGAAAAAGTCTGGAATATTTCAAGAATTACCAAAATATGACCCAGTGACATGAAG
TGAGCAAATGCTGTTGGAAAAATGGTGCTGATAGACATGCTCAATGCAGGGTTGCCACAA
ACCTTCAATTTGTAAAAAAAAAACCCAAAAAAACAAAAACCATATATATGTATATACATG
CACAACACAGTAAAATGAAGTATGCTTGTATTCCTGTTTATTTCTGTCAATATTATTCTA
GAATCAGCTAACACGCCACAATTATTATTGTACGTATTCATGTAATAAAAGGTCTGTTTC
ATGACACCTGACCTATCTTACTGATTATAGCGATAGACTAGGGCCCTAAAAGAGAAAAAC
CTATTAGAGCTGAATATTAAAAACCATATAAACAAAAATTTATGTTAAAACTTGGATCTT
TAGAACAGCCAAGTGGTCTGTCATAACAGAGTTGTTACTGTAAAAATTGTTAAAAAGTGG
AGTTCTCTGGTGCCCCAAACAGGTTAAGGGTCGGCATTGTTACTGCTGTGGCTCTGGTTG
CAGGTGTGTTGTGGGTTTGATCCCTGGCCTGGGAATTTTCGTATTCCATGGGCACAGTCT
CCCAATAAAGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGTGAGCAATGTAGTTCCACAAATTAAAAAAATGTTATACATCTGTGAAACACCCAAA
TCTGAGCCACAACAGGAGCTCCCACCTCTACCTTTTTCTATTTGCCTTCAGGGACCTACT
ACATTAAAGAGGAAAAAAAAAAAAAAAAAAAACCTAAGTTTTCCTCTTGTATGAACACTT
CCTAATTTCAGTACAGGTATGCCTCACAGATATTGCAGGTTCTATTCCAGACCATTGCAA
TAAAGTAAATATTACAATAAAGCAACTCATGAATTTTTTGGTTTTGCAGTGCATACATAT
GTTTACACTATACTATAGTCTATCAAGTGTGCAAAGCAATGTAGCTAAAAGCAATGTATG
ACTTAATTTAAAAATACTTTAGCTAAAAAATGCTAAACATCATCTGAGACTTTAGCAAGT
CATAATCTTTTAAAATAGTAATATCAGAGATCACTGATCAAAGATCACCATAACAAATAC
ACTAATGAAAAAGTCTGGAATATTTCAAGAATTACCAAAATATGACCCAGTGACATGAAG
TGAGCAAATGCTGTTGGAAAAATGGTGCTGATAGACATGCTCAATGCAGGGTTGCCACAA
ACCTTCAATTTGTAAAAAAAAAACCCAAAAAAACAAAAACCATATATATGTATATACATG
CACAACACAGTAAAATGAAGTATGCTTGTATTCCTGTTTATTTCTGTCAATATTATTCTA
GAATCAGCTAACACGCCACAATTATTATTGTACGTATTCATGTAATAAAAGGTCTGTTTC
ATGACACCTGACCTATCTTACTGATTATAGCGATAGACTAGGGCCCTAAAAGAGAAAAAC
CTATTAGAGCTGAATATTAAAAACCATATAAACAAAAATTTATGTTAAAACTTGGATCTT
TAGAACAGCCAAGTGGTCTGTCATAACAGAGTTGTTACTGTAAAAATTGTTAAAAAGTGG
AGTTCTCTGGTGCCCCAAACAGGTTAAGGGTCGGCATTGTTACTGCTGTGGCTCTGGTTG
CAGGTGTGTTGTGGGTTTGATCCCTGGCCTGGGAATTTTCGTATTCCATGGGCACAGTCT
CCCAATAAAGAA

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               182-623, gnl|bosTau2|chr1 (57103134-57103569)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               182-623, gnl|bosTau2|chr1 (57103134-57103569)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)