Non-Coding RNA Search

Ss1.1-Pig4-TMW8068O10.3

Sequence:


               
               GATAAATACATACCTATCAACATGTCTCCACCAGGGCTCAACAAACTCCTCTGTAAAGAG
ACAGATGGTCAATATTTTAGTAAATATTTTAAGTCTTGTGGGCCATATGATCTATCACAA
GTACTCAACTTGGCGGTAAATATAAAAGCAGCAGCCATACACAATATGTAAATAAAGTGG
GTGTGGTTGTATTTCAATAAAACTTTATTTGCAGAAACTGGCAGTAGGTCACATTAGGCC
TGCTGGCTATAGACCTCTGTTCTAGATTTTACTCTTAGCCTTTTTTTGCAAATGAGTATT
GTTCCATTTACAGTATTATTCATTTGGATACTTGGTTTTTTGATTCTGTACTAGTAAATG
TTTTCTAATCACTGAGAAATTTAAGAACTGGGCCCTGTATTTGGGTCTCTGAGATTAGGG
AGCATCTGTCAGGATACTTTGTTTTATCAGGGTTACTTCTTTTTACTACCTCTTAGATTT
TGGTGTTCTTTACTGGTGCAATATTGTAGTCTTTGCTTGCCTGTGATTTTTAGTAAAATA
AACTAAGCCTTTGAAATATTATAGCATGATAAGTAAAAATTTCTAAATATTATGGCATTT
TAGTATGTTTTGGTCAATGTAAGACATCTCTTTGGTGTTTACTACTTGCTTATAATCAAG
ATTTCCCAAGCTCTTCAAGCTCCCTTTTAATGAAATTTATTGTAAACCATCAATTTCAAT
AAATTAGTATTTTCACAGTCAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATAAATACATACCTATCAACATGTCTCCACCAGGGCTCAACAAACTCCTCTGTAAAGAG
ACAGATGGTCAATATTTTAGTAAATATTTTAAGTCTTGTGGGCCATATGATCTATCACAA
GTACTCAACTTGGCGGTAAATATAAAAGCAGCAGCCATACACAATATGTAAATAAAGTGG
GTGTGGTTGTATTTCAATAAAACTTTATTTGCAGAAACTGGCAGTAGGTCACATTAGGCC
TGCTGGCTATAGACCTCTGTTCTAGATTTTACTCTTAGCCTTTTTTTGCAAATGAGTATT
GTTCCATTTACAGTATTATTCATTTGGATACTTGGTTTTTTGATTCTGTACTAGTAAATG
TTTTCTAATCACTGAGAAATTTAAGAACTGGGCCCTGTATTTGGGTCTCTGAGATTAGGG
AGCATCTGTCAGGATACTTTGTTTTATCAGGGTTACTTCTTTTTACTACCTCTTAGATTT
TGGTGTTCTTTACTGGTGCAATATTGTAGTCTTTGCTTGCCTGTGATTTTTAGTAAAATA
AACTAAGCCTTTGAAATATTATAGCATGATAAGTAAAAATTTCTAAATATTATGGCATTT
TAGTATGTTTTGGTCAATGTAAGACATCTCTTTGGTGTTTACTACTTGCTTATAATCAAG
ATTTCCCAAGCTCTTCAAGCTCCCTTTTAATGAAATTTATTGTAAACCATCAATTTCAAT
AAATTAGTATTTTCACAGTCAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-743, gnl|bosTau2|chr3 (57506389-57505626)
               

               
               7-743, gnl|Hg17|chr1 (60052159-60052917)
               

               
               7-743, gnl|Mm7|chr4 (95416365-95417026)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-743, gnl|bosTau2|chr3 (57506389-57505626)
               

               
               7-743, gnl|Hg17|chr1 (60052159-60052917)
               

               
               7-743, gnl|Mm7|chr4 (95416365-95417026)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ski (0.146735)
               

               
               ova (0.129132)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ski (0.146735)
               

               
               ova (0.129132)

	7-743, gnl\|bosTau2\|chr3 (57506389-57505626)
	7-743, gnl\|Hg17\|chr1 (60052159-60052917)
	7-743, gnl\|Mm7\|chr4 (95416365-95417026)