Ss1.1-Pla1-C000001059_E14.5
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AGTTCCTCCAGTTTCCATGTCCAAGCCTGATGTGTCACATATTAGCCATAACTACGTATT
TATTATTATTATTTTTTTTGATGAACACTCTTTCACCTCACTGAGCCAATTTCATTTAAT
TGTCCAGTAAGTATCTGCATGGTTGAAATCATGGTATATCTGTGAATGTGTATATGCAGC
CTATACACACAATATACAAGCTTTCTCTGGGCCAAACTGCTTCATTCACTTTTTTTTTCT
TTTTTCTTTTTTCTTTTTTTTTTTGTTCCTTTCTCTTCTTTGCCTTATGATGAATTTGTT
TGAAGGGCATTTTCTTCAGAACAAAGGCTTTGATGCATATTCCTTTCTGCGTGAAACGGG
GGTAGTATTGTTCCCTGAGGAAAATTGCACAGTGAAAACCGGTCTAGTTGTGACCCACTC
TGTGTTTAAGTTTGTTTTTTTTTTTTTAAGTCACTATCACACAAACTGAATTTTGCTGAC
CATGTTTGTAATCTGTTGGTTTGTCTTAACGAAGTTTGGTTGATGCCATCCTTTGCACTG
CTGAAGTGAAATCTTGCTTATTAATTACTTAGCTATTTGCCGATCCCGGTATGGGCAGTG
TAGCCACAAAACCAAAATGGCTGGACAGACTTCTTGTGTTTGTAAATATAAAAAAATGAC
TGTTCTGTATATGTGTTTTTTATGTGATAGTGGAGTATTTCCTTCAAGTGAAGCTTCACT
GAAGGAGACAGTGATGTTTTTTGTTTAGCAAGTTTAGAGTGATGATACAACTGTAAGAAA
TAATATAAATGTTGAAGAAAGCATCACAACAGAACTGTAGGAGTCCCAATTTAATAAACC
ATCCCCCCCCAAAAAAAAAAAAAAACCAAGTGTCTAGAATATACCATGTTTATTATTTAA
AATCATTGTCTTAAGTTTTTTGTTCAAAAAATAAAAATTTGAATACAAAAAAAAAAAAAA
AAAAAAAAAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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AGTTCCTCCAGTTTCCATGTCCAAGCCTGATGTGTCACATATTAGCCATAACTACGTATT
TATTATTATTATTTTTTTTGATGAACACTCTTTCACCTCACTGAGCCAATTTCATTTAAT
TGTCCAGTAAGTATCTGCATGGTTGAAATCATGGTATATCTGTGAATGTGTATATGCAGC
CTATACACACAATATACAAGCTTTCTCTGGGCCAAACTGCTTCATTCACTTTTTTTTTCT
TTTTTCTTTTTTCTTTTTTTTTTTGTTCCTTTCTCTTCTTTGCCTTATGATGAATTTGTT
TGAAGGGCATTTTCTTCAGAACAAAGGCTTTGATGCATATTCCTTTCTGCGTGAAACGGG
GGTAGTATTGTTCCCTGAGGAAAATTGCACAGTGAAAACCGGTCTAGTTGTGACCCACTC
TGTGTTTAAGTTTGTTTTTTTTTTTTTAAGTCACTATCACACAAACTGAATTTTGCTGAC
CATGTTTGTAATCTGTTGGTTTGTCTTAACGAAGTTTGGTTGATGCCATCCTTTGCACTG
CTGAAGTGAAATCTTGCTTATTAATTACTTAGCTATTTGCCGATCCCGGTATGGGCAGTG
TAGCCACAAAACCAAAATGGCTGGACAGACTTCTTGTGTTTGTAAATATAAAAAAATGAC
TGTTCTGTATATGTGTTTTTTATGTGATAGTGGAGTATTTCCTTCAAGTGAAGCTTCACT
GAAGGAGACAGTGATGTTTTTTGTTTAGCAAGTTTAGAGTGATGATACAACTGTAAGAAA
TAATATAAATGTTGAAGAAAGCATCACAACAGAACTGTAGGAGTCCCAATTTAATAAACC
ATCCCCCCCCAAAAAAAAAAAAAAACCAAGTGTCTAGAATATACCATGTTTATTATTTAA
AATCATTGTCTTAAGTTTTTTGTTCAAAAAATAAAAATTTGAATACAAAAAAAAAAAAAA
AAAAAAAAAAAA
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54-235, gnl|bosTau2|chr8 (55832989-55833170) |
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54-235, gnl|canFam2|chr11 (69504137-69504567) |
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54-235, gnl|dasNov1|scaffold_15068 (4554-4118) |
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54-235, gnl|echTel1|scaffold_318174 (5166-5585) |
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54-235, gnl|hg17|chr9 (111776110-111776530) |
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54-235, gnl|Hg17|chr9 (111776384-111776555) |
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54-235, gnl|loxAfr1|scaffold_6542 (20447-20018) |
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54-235, gnl|mm7|chr4 (59263110-59263507) |
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54-235, gnl|Mm7|chr4 (59263358-59263552) |
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54-235, gnl|monDom2|scaffold_19 (35346878-35346451) |
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54-235, gnl|oryCun1|scaffold_89115 (4-438) |
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54-235, gnl|panTro1|chr11 (96295346-96295765) |
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54-235, gnl|rheMac2|chr15 (24178377-24177946) |
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54-235, gnl|rn3|chr5 (77299675-77300069) |
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54-235, gnl|xenTro1|scaffold_196 (873654-874083) |
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264-954, gnl|bosTau2|chr8 (55833153-55833809) |
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264-954, gnl|Hg17|chr9 (111776538-111777204) |
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264-954, gnl|Mm7|chr4 (59263515-59264222) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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54-235, gnl|bosTau2|chr8 (55832989-55833170) |
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54-235, gnl|canFam2|chr11 (69504137-69504567) |
|
54-235, gnl|dasNov1|scaffold_15068 (4554-4118) |
|
54-235, gnl|echTel1|scaffold_318174 (5166-5585) |
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54-235, gnl|hg17|chr9 (111776110-111776530) |
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54-235, gnl|Hg17|chr9 (111776384-111776555) |
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54-235, gnl|loxAfr1|scaffold_6542 (20447-20018) |
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54-235, gnl|mm7|chr4 (59263110-59263507) |
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54-235, gnl|Mm7|chr4 (59263358-59263552) |
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54-235, gnl|monDom2|scaffold_19 (35346878-35346451) |
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54-235, gnl|oryCun1|scaffold_89115 (4-438) |
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54-235, gnl|panTro1|chr11 (96295346-96295765) |
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54-235, gnl|rheMac2|chr15 (24178377-24177946) |
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54-235, gnl|rn3|chr5 (77299675-77300069) |
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54-235, gnl|xenTro1|scaffold_196 (873654-874083) |
| |
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264-954, gnl|bosTau2|chr8 (55833153-55833809) |
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264-954, gnl|Hg17|chr9 (111776538-111777204) |
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264-954, gnl|Mm7|chr4 (59263515-59264222) |
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cbe (0.717703) |
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hea (0.408998) |
|
sin (0.349895) |
|
eje (0.296501) |
|
sug (0.254582) |
|
mgp (0.230681) |
|
gul (0.177588) |
|
rec (0.17307) |
|
nje (0.16592) |
|
nco (0.161734) |
|
fco (0.157208) |
|
isp (0.150376) |
|
ski (0.146735) |
|
spl (0.143184) |
|
kid (0.129735) |
|
ret (0.128733) |
|
thg (0.126791) |
|
tra (0.123092) |
|
ebs (0.118301) |
|
cty (0.10408) |
|
cbe (0.717703) |
|
hea (0.408998) |
|
sin (0.349895) |
|
eje (0.296501) |
|
sug (0.254582) |
|
mgp (0.230681) |
|
gul (0.177588) |
|
rec (0.17307) |
|
nje (0.16592) |
|
nco (0.161734) |
|
fco (0.157208) |
|
isp (0.150376) |
|
ski (0.146735) |
|
spl (0.143184) |
|
kid (0.129735) |
|
ret (0.128733) |
|
thg (0.126791) |
|
tra (0.123092) |
|
ebs (0.118301) |
|
cty (0.10408) |
