Ss1.1-Pla1-C0000023_M01.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGGCCCGGTGCTGAAGGGCAGGGAACAACTGATGGTGCTACTTTGAACTGCTTTTCTTT TCTCCTTTTTGCACAAAGAGTCTCATGTCTGATATTTAGACATGACGAGCTTTGTGCAAA AGGGGACCTGGTTACTTTTTGCTCTACTTCATCCCACTGTTATTTTGGCACAACAACAGG AAGCTATTGAAGGAGGATGCTCCCATCTTGGTCAGTCCTATGCGGATAGAGATGTCTGGA AGCCAGAACCATGCCAAATATGCGTCTGTGACTCAGGATCTGTTCTCTGCGATGATATAA TATGTGATGATCAAGAATTAGACTGTCCCAACCCTGAGATCCCATTTGGAGAATGTTGTG CAGTTTGTCCACAACCTCCAACAGCTCCCACCCGCCCTCCCAATGGTCATGGACCTCAAG GCCCCAAGGGAGATCCAGGCCCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGGCCCGGTGCTGAAGGGCAGGGAACAACTGATGGTGCTACTTTGAACTGCTTTTCTTT TCTCCTTTTTGCACAAAGAGTCTCATGTCTGATATTTAGACATGACGAGCTTTGTGCAAA AGGGGACCTGGTTACTTTTTGCTCTACTTCATCCCACTGTTATTTTGGCACAACAACAGG AAGCTATTGAAGGAGGATGCTCCCATCTTGGTCAGTCCTATGCGGATAGAGATGTCTGGA AGCCAGAACCATGCCAAATATGCGTCTGTGACTCAGGATCTGTTCTCTGCGATGATATAA TATGTGATGATCAAGAATTAGACTGTCCCAACCCTGAGATCCCATTTGGAGAATGTTGTG CAGTTTGTCCACAACCTCCAACAGCTCCCACCCGCCCTCCCAATGGTCATGGACCTCAAG GCCCCAAGGGAGATCCAGGCCCTC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 39-175, + strand, RNAz p=0.992213 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 39-175, + strand, RNAz p=0.992213 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of BC028178, + |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 1-175, gnl|bosTau2|chr2 (3157455-3157281) | |
| 1-175, gnl|Hg17|chr2 (189664620-189664795) | |
| 1-175, gnl|Mm7|chr1 (45548261-45548436) | |
| 182-386, gnl|bosTau2|chr2 (3146791-3146587) | |
| 182-386, gnl|Hg17|chr2 (189674990-189675194) | |
| 182-386, gnl|Mm7|chr1 (45558107-45558311) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-175, gnl|bosTau2|chr2 (3157455-3157281) | |
| 1-175, gnl|Hg17|chr2 (189664620-189664795) | |
| 1-175, gnl|Mm7|chr1 (45548261-45548436) | |
| 182-386, gnl|bosTau2|chr2 (3146791-3146587) | |
| 182-386, gnl|Hg17|chr2 (189674990-189675194) | |
| 182-386, gnl|Mm7|chr1 (45558107-45558311) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.20816) | |
| eep (0.122564) |