Non-Coding RNA Search

Ss1.1-Pla1-C0000024_F03.5

Sequence:


               
               GCGCGCCATGGAGGGTGACCCGGTTGGGTGCCTGCGTGCCGCTGGAGGTGCCAGCGGCAG
AGGAGGCGGATCCCCAGGTAGCTTCTTGGAGCGGGGACAGCGGCAACGTGTCCCAGAGCC
ACAGCAGCGCCTCTGGGCCGTGGGAGGACGAGGGTCCCGAGCTGGGCGCGCCGGGCCGGG
ACCTGCCGCTGCTGCGCCGCGCAGCCGCCGGCTACGCCACCTGCTTGCTGCCCAGCGCCG
GGGCGCGGCCCGAGGTCGAGGCCTTGGACGCGAGCCTGGAGGATCTGCTCACCAGGGTGG
ACGAGTTTGTGGGTATGCTCGACATGCTGCGCGGCGACTCCTCCCACGTGGTTAGCGAGG
GCGTGCCTCGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGCGCCATGGAGGGTGACCCGGTTGGGTGCCTGCGTGCCGCTGGAGGTGCCAGCGGCAG
AGGAGGCGGATCCCCAGGTAGCTTCTTGGAGCGGGGACAGCGGCAACGTGTCCCAGAGCC
ACAGCAGCGCCTCTGGGCCGTGGGAGGACGAGGGTCCCGAGCTGGGCGCGCCGGGCCGGG
ACCTGCCGCTGCTGCGCCGCGCAGCCGCCGGCTACGCCACCTGCTTGCTGCCCAGCGCCG
GGGCGCGGCCCGAGGTCGAGGCCTTGGACGCGAGCCTGGAGGATCTGCTCACCAGGGTGG
ACGAGTTTGTGGGTATGCTCGACATGCTGCGCGGCGACTCCTCCCACGTGGTTAGCGAGG
GCGTGCCTCGCA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61834825|ref|XP_596737.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61834825|ref|XP_596737.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               60-372, gnl|bosTau2|chr6 (65689111-65689423)
               

               
               60-372, gnl|Hg17|chr4 (6836048-6836369)
               

               
               60-372, gnl|Mm7|chr5 (35830035-35829726)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               60-372, gnl|bosTau2|chr6 (65689111-65689423)
               

               
               60-372, gnl|Hg17|chr4 (6836048-6836369)
               

               
               60-372, gnl|Mm7|chr5 (35830035-35829726)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               che (0.136314)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)

	60-372, gnl\|bosTau2\|chr6 (65689111-65689423)
	60-372, gnl\|Hg17\|chr4 (6836048-6836369)
	60-372, gnl\|Mm7\|chr5 (35830035-35829726)