Non-Coding RNA Search

Ss1.1-Pla1-C0000027_C14.5

Sequence:


               
               CCCTGGAGGCCCCCATGTTTGAGATCCCCCTGCAGAATGCAGTGGTGGCTCCGGGGGCAG
ATGTGCTGCTCAAATGTATCATCACCGCCAACCCGCCGCCCCAAGTGTCCTGGCAGAAGG
ATGGGTCCTCGCTGCGCAGTGACGGCCGCCTTCTGATCCGGTCTGAAGGCGAGCGGCACA
CCCTGCTGCTGCGGGAGGCCCGGGCAGCCGATGCTGGGAGCTACACGGTCACCGCCACCA
ACGAGCTGGGCCAGGCCAGCTGTGCTGCCGTGCTGGCCGTGAGACCTGGAGGGTCCACAT
CCCCTTTCAGCAGCCCCATCACCTCTGACGAGGAGTACCTGAGCCCCCCAGAGGAGTTCC
CGGAGCCTGGGGAGACCTGGCCACAAGCCACCACCATGAAGCTCAGTCCTGACCCAAACC
GCCGTTCCTCTGACACTGGCTCCAAAGCGCCCCCCACCTTCAAGGTCTCACTGATGGACC
AATCAGTAAGAGAAGGCCAGGACGTCACTATGAGCATCCGTGTGCAGGGGGAGCCCAAGC
CAGTGGTGTCCTGGCTGAGGAACCGCCAGCCCGTGCGCCCGGACCAGCGGCGCTTCGCCG
AGGAGGCAGAGGGCGGGCTGTGCCGGCTTCGGATCCTGGCAGCCGAGCGGGGCGACGCCG
GCTTCTACACTTGCAAAGCGGTTAACGAGTATGGCGCTCGGCAGTGCGAGGCGCGCCTGG
AGGTCAGAGGCGAGTGAGCTCAGGGGGCCGCCTGCGCTCCCCCCGCTGCCCTCCGAGCCG
CGCCCCTGTCTCAGGCACCTCTCGGACCTCGCTGTGTTTCACTGCCTCCTGCCCACAGAC
CCTGCCGGCCCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCTGGAGGCCCCCATGTTTGAGATCCCCCTGCAGAATGCAGTGGTGGCTCCGGGGGCAG
ATGTGCTGCTCAAATGTATCATCACCGCCAACCCGCCGCCCCAAGTGTCCTGGCAGAAGG
ATGGGTCCTCGCTGCGCAGTGACGGCCGCCTTCTGATCCGGTCTGAAGGCGAGCGGCACA
CCCTGCTGCTGCGGGAGGCCCGGGCAGCCGATGCTGGGAGCTACACGGTCACCGCCACCA
ACGAGCTGGGCCAGGCCAGCTGTGCTGCCGTGCTGGCCGTGAGACCTGGAGGGTCCACAT
CCCCTTTCAGCAGCCCCATCACCTCTGACGAGGAGTACCTGAGCCCCCCAGAGGAGTTCC
CGGAGCCTGGGGAGACCTGGCCACAAGCCACCACCATGAAGCTCAGTCCTGACCCAAACC
GCCGTTCCTCTGACACTGGCTCCAAAGCGCCCCCCACCTTCAAGGTCTCACTGATGGACC
AATCAGTAAGAGAAGGCCAGGACGTCACTATGAGCATCCGTGTGCAGGGGGAGCCCAAGC
CAGTGGTGTCCTGGCTGAGGAACCGCCAGCCCGTGCGCCCGGACCAGCGGCGCTTCGCCG
AGGAGGCAGAGGGCGGGCTGTGCCGGCTTCGGATCCTGGCAGCCGAGCGGGGCGACGCCG
GCTTCTACACTTGCAAAGCGGTTAACGAGTATGGCGCTCGGCAGTGCGAGGCGCGCCTGG
AGGTCAGAGGCGAGTGAGCTCAGGGGGCCGCCTGCGCTCCCCCCGCTGCCCTCCGAGCCG
CGCCCCTGTCTCAGGCACCTCTCGGACCTCGCTGTGTTTCACTGCCTCCTGCCCACAGAC
CCTGCCGGCCCG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q6FGA6_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q6FGA6_HUMAN

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               99-293, gnl|bosTau2|chr2 (64413693-64413497)
               

               
               99-293, gnl|Hg17|chr2 (220141844-220142040)
               

               
               99-293, gnl|Mm7|chr1 (75617948-75618144)
               


               
               553-742, gnl|bosTau2|chr2 (64402002-64401814)
               

               
               553-742, gnl|Hg17|chr2 (220154659-220154847)
               

               
               553-742, gnl|Mm7|chr1 (75628491-75628672)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               99-293, gnl|bosTau2|chr2 (64413693-64413497)
               

               
               99-293, gnl|Hg17|chr2 (220141844-220142040)
               

               
               99-293, gnl|Mm7|chr1 (75617948-75618144)
               


               
               553-742, gnl|bosTau2|chr2 (64402002-64401814)
               

               
               553-742, gnl|Hg17|chr2 (220154659-220154847)
               

               
               553-742, gnl|Mm7|chr1 (75628491-75628672)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	99-293, gnl\|bosTau2\|chr2 (64413693-64413497)
	99-293, gnl\|Hg17\|chr2 (220141844-220142040)
	99-293, gnl\|Mm7\|chr1 (75617948-75618144)

	553-742, gnl\|bosTau2\|chr2 (64402002-64401814)
	553-742, gnl\|Hg17\|chr2 (220154659-220154847)
	553-742, gnl\|Mm7\|chr1 (75628491-75628672)