Non-Coding RNA Search

Ss1.1-Pla1-C0000028_P03.5

Sequence:


               
               CCCAAGTTTAAAATGCCTGACCTGCACCTCAAGGCACCCAAGATCTCCATGCCTGAGGTT
GACCTGAACCTGAAGGGTCCCAAGGTGAAGGGTGATGTGGATGTTTCTCTGCCTAAGGTG
GAAGGTGACCTCAAAGGCCCTGAAGTTGACCTCAAGGGCCCCAAGGTGGACATTGATGTC
CCAGATGTGGACGTTCATGGCCCAGACTGGCACCTGAAGATGCCCAAGGTGAAAATGCCC
AAGTTCAGCATGCCTGGCTTCAAAGGCGAGGGCCCAGAAGTGGATGTGAACCTGCCCAAG
GCCGACATTGATGTCTCAGGACCCAAGGTGGACATAGACGCTCCTGACATCCAGCTTCCT
GAGGTGGAGCTGACAGTTTCCACAAAGAAAGAGTAGCACGCTTGTGCGTGTGCGTGTGTG
TGTGTACATATCTGTATAAAAATACATCAGCCTTGGGTGTGTTTGTATATAAACTCCAAA
GAGGAACACGCCGACAGCCTCAGCAATAATGCGAAGATCGGGCCTCTGCCAGGGGCAAGC
GCTGAAAAGCCAACCGACCGTCTTTAGGCTCCTCCTGGAGCTTTACAGATAGGGAAGGGG
TTCCAGGATCTTTGTCCAGCCCGTGTGCAAAGTCGACAGTATTTGCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCAAGTTTAAAATGCCTGACCTGCACCTCAAGGCACCCAAGATCTCCATGCCTGAGGTT
GACCTGAACCTGAAGGGTCCCAAGGTGAAGGGTGATGTGGATGTTTCTCTGCCTAAGGTG
GAAGGTGACCTCAAAGGCCCTGAAGTTGACCTCAAGGGCCCCAAGGTGGACATTGATGTC
CCAGATGTGGACGTTCATGGCCCAGACTGGCACCTGAAGATGCCCAAGGTGAAAATGCCC
AAGTTCAGCATGCCTGGCTTCAAAGGCGAGGGCCCAGAAGTGGATGTGAACCTGCCCAAG
GCCGACATTGATGTCTCAGGACCCAAGGTGGACATAGACGCTCCTGACATCCAGCTTCCT
GAGGTGGAGCTGACAGTTTCCACAAAGAAAGAGTAGCACGCTTGTGCGTGTGCGTGTGTG
TGTGTACATATCTGTATAAAAATACATCAGCCTTGGGTGTGTTTGTATATAAACTCCAAA
GAGGAACACGCCGACAGCCTCAGCAATAATGCGAAGATCGGGCCTCTGCCAGGGGCAAGC
GCTGAAAAGCCAACCGACCGTCTTTAGGCTCCTCCTGGAGCTTTACAGATAGGGAAGGGG
TTCCAGGATCTTTGTCCAGCCCGTGTGCAAAGTCGACAGTATTTGCCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q13727_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q13727_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               345-648, gnl|bosTau2|chr29 (31984053-31983773)
               

               
               345-648, gnl|Hg17|chr11 (62040843-62040553)
               

               
               345-648, gnl|Mm7|chr19 (8698435-8698716)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               345-648, gnl|bosTau2|chr29 (31984053-31983773)
               

               
               345-648, gnl|Hg17|chr11 (62040843-62040553)
               

               
               345-648, gnl|Mm7|chr19 (8698435-8698716)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eep (0.122564)
               

               
               jca (0.11396)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)
               

               
               jca (0.11396)

	345-648, gnl\|bosTau2\|chr29 (31984053-31983773)
	345-648, gnl\|Hg17\|chr11 (62040843-62040553)
	345-648, gnl\|Mm7\|chr19 (8698435-8698716)