Ss1.1-Pla1-C0000029_F01.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGATCCACCGAGATGTGAAGCCATCCAACGTCCTCATCAACAAGGAGGGCCACGTGAAG ATGTGTGACTTCGGGATCAGCGGCTACTTGGTGGACTCCGTGGCCAAGACCATGGACGCC GGCTGCAAGCCCTACATGGCGCCCGAGAGGATCAATCCAGAGCTGAACCAGAAAGGCTAC AATGTCAAGTCTGATGTCTGGAGTCTGGGCATCACCATGATCGAGATGGCCATCCTGCGG TTTCCTTATGAGTCGTGGGGCACCCCGTTCCAGCAGCTGAAGCAGGTGGTGGAGGAGCCG TCCCCTCAGCTCCCAGCTGACCGCTTCTCCCCCGAGTTTGTGGACTTCACCGCACAGTGC CTGAGAAAGAACCCCGCAGAACGCATGAGCTACCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGATCCACCGAGATGTGAAGCCATCCAACGTCCTCATCAACAAGGAGGGCCACGTGAAG ATGTGTGACTTCGGGATCAGCGGCTACTTGGTGGACTCCGTGGCCAAGACCATGGACGCC GGCTGCAAGCCCTACATGGCGCCCGAGAGGATCAATCCAGAGCTGAACCAGAAAGGCTAC AATGTCAAGTCTGATGTCTGGAGTCTGGGCATCACCATGATCGAGATGGCCATCCTGCGG TTTCCTTATGAGTCGTGGGGCACCCCGTTCCAGCAGCTGAAGCAGGTGGTGGAGGAGCCG TCCCCTCAGCTCCCAGCTGACCGCTTCTCCCCCGAGTTTGTGGACTTCACCGCACAGTGC CTGAGAAAGAACCCCGCAGAACGCATGAGCTACCTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 12-140, gnl|bosTau2|chr19 (27690334-27690462) | |
| 12-140, gnl|canFam2|chr5 (45754282-45754438) | |
| 12-140, gnl|danRer3|chr12 (33084125-33084261) | |
| 12-140, gnl|dasNov1|scaffold_58670 (3376-3512) | |
| 12-140, gnl|echTel1|scaffold_299581 (4654-4809) | |
| 12-140, gnl|fr1|chrUn (311711635-311711477) | |
| 12-140, gnl|galGal2|chr14 (6608467-6608315) | |
| 12-140, gnl|hg17|chr17 (21148314-21148467) | |
| 12-140, gnl|Hg17|chr17 (21148329-21148457) | |
| 12-140, gnl|loxAfr1|scaffold_93521 (1707-1551) | |
| 12-140, gnl|mm7|chr11 (61028183-61028343) | |
| 12-140, gnl|Mm7|chr11 (61028200-61028328) | |
| 12-140, gnl|monDom2|scaffold_17 (7432968-7432810) | |
| 12-140, gnl|oryCun1|scaffold_181672 (12422-12541) | |
| 12-140, gnl|panTro1|chr19 (21520881-21521034) | |
| 12-140, gnl|rheMac2|chr16 (20475602-20475755) | |
| 12-140, gnl|rn3|chr10 (47103492-47103652) | |
| 12-140, gnl|tetNig1|chr2 (1940252-1940113) | |
| 12-140, gnl|xenTro1|scaffold_147 (33495-33636) | |
| 219-359, gnl|bosTau2|chr19 (27692670-27692810) | |
| 219-359, gnl|canFam2|chr5 (45759562-45759739) | |
| 219-359, gnl|danRer3|chr12 (33089384-33089531) | |
| 219-359, gnl|dasNov1|scaffold_102983 (3293-3444) | |
| 219-359, gnl|echTel1|scaffold_297826 (492-661) | |
| 219-359, gnl|fr1|chrUn (311711141-311710979) | |
| 219-359, gnl|galGal2|chr14 (6606190-6606036) | |
| 219-359, gnl|hg17|chr17 (21156038-21156207) | |
| 219-359, gnl|Hg17|chr17 (21156046-21156186) | |
| 219-359, gnl|loxAfr1|scaffold_42622 (10933-10764) | |
| 219-359, gnl|mm7|chr11 (61031470-61031627) | |
| 219-359, gnl|Mm7|chr11 (61031478-61031618) | |
| 219-359, gnl|monDom2|scaffold_17 (7427496-7427324) | |
| 219-359, gnl|oryCun1|scaffold_181672 (12620-12728) | |
| 219-359, gnl|panTro1|chr19 (21528589-21528759) | |
| 219-359, gnl|rheMac2|chr16 (20483564-20483733) | |
| 219-359, gnl|rn3|chr10 (47106918-47107075) | |
| 219-359, gnl|tetNig1|chr2 (1939852-1939689) | |
| 219-359, gnl|xenTro1|scaffold_147 (34422-34583) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 12-140, gnl|bosTau2|chr19 (27690334-27690462) | |
| 12-140, gnl|canFam2|chr5 (45754282-45754438) | |
| 12-140, gnl|danRer3|chr12 (33084125-33084261) | |
| 12-140, gnl|dasNov1|scaffold_58670 (3376-3512) | |
| 12-140, gnl|echTel1|scaffold_299581 (4654-4809) | |
| 12-140, gnl|fr1|chrUn (311711635-311711477) | |
| 12-140, gnl|galGal2|chr14 (6608467-6608315) | |
| 12-140, gnl|hg17|chr17 (21148314-21148467) | |
| 12-140, gnl|Hg17|chr17 (21148329-21148457) | |
| 12-140, gnl|loxAfr1|scaffold_93521 (1707-1551) | |
| 12-140, gnl|mm7|chr11 (61028183-61028343) | |
| 12-140, gnl|Mm7|chr11 (61028200-61028328) | |
| 12-140, gnl|monDom2|scaffold_17 (7432968-7432810) | |
| 12-140, gnl|oryCun1|scaffold_181672 (12422-12541) | |
| 12-140, gnl|panTro1|chr19 (21520881-21521034) | |
| 12-140, gnl|rheMac2|chr16 (20475602-20475755) | |
| 12-140, gnl|rn3|chr10 (47103492-47103652) | |
| 12-140, gnl|tetNig1|chr2 (1940252-1940113) | |
| 12-140, gnl|xenTro1|scaffold_147 (33495-33636) | |
| 219-359, gnl|bosTau2|chr19 (27692670-27692810) | |
| 219-359, gnl|canFam2|chr5 (45759562-45759739) | |
| 219-359, gnl|danRer3|chr12 (33089384-33089531) | |
| 219-359, gnl|dasNov1|scaffold_102983 (3293-3444) | |
| 219-359, gnl|echTel1|scaffold_297826 (492-661) | |
| 219-359, gnl|fr1|chrUn (311711141-311710979) | |
| 219-359, gnl|galGal2|chr14 (6606190-6606036) | |
| 219-359, gnl|hg17|chr17 (21156038-21156207) | |
| 219-359, gnl|Hg17|chr17 (21156046-21156186) | |
| 219-359, gnl|loxAfr1|scaffold_42622 (10933-10764) | |
| 219-359, gnl|mm7|chr11 (61031470-61031627) | |
| 219-359, gnl|Mm7|chr11 (61031478-61031618) | |
| 219-359, gnl|monDom2|scaffold_17 (7427496-7427324) | |
| 219-359, gnl|oryCun1|scaffold_181672 (12620-12728) | |
| 219-359, gnl|panTro1|chr19 (21528589-21528759) | |
| 219-359, gnl|rheMac2|chr16 (20483564-20483733) | |
| 219-359, gnl|rn3|chr10 (47106918-47107075) | |
| 219-359, gnl|tetNig1|chr2 (1939852-1939689) | |
| 219-359, gnl|xenTro1|scaffold_147 (34422-34583) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| col (0.195008) | |
| pla (0.133672) |