Non-Coding RNA Search

Ss1.1-Pla1-C0000032_K09.5

Sequence:


               
               GTTATTTTTAGTAAACTTTGCCATTCAACAATCAGAGAGACATATTTTGGAGGCTTCTTC
CAATCAAGGTAGAAAAGGTCTTAGGTAGTAGGAAAGGCAGACGCAATGTCCTACCATTTT
CATAGTAGAGCTTACAAGTGAAGGAATTTATCCAAATAGGTTATTTTCATTGTGTAGCAC
CAGTAAAAATAGTGGTCTCATTAATCACTGAATGTGATGAAGTTTTATGTCGCTTCCTAC
CTTGCTCTAAAGAATTTTGTCATTAAAGGCCATATTATTTTCTCTGAGCAGTTTCCATTG
TAAGGTTGAATATCTTTTTCTTCATTCAAATCATCATTATAGGTTAAGTTAATCAAATAG
GAGTTAAAATAAGTTATATTTGATCTTTTTTCCCTGAAAATAATGGTGAACCTATTGTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTATTTTTAGTAAACTTTGCCATTCAACAATCAGAGAGACATATTTTGGAGGCTTCTTC
CAATCAAGGTAGAAAAGGTCTTAGGTAGTAGGAAAGGCAGACGCAATGTCCTACCATTTT
CATAGTAGAGCTTACAAGTGAAGGAATTTATCCAAATAGGTTATTTTCATTGTGTAGCAC
CAGTAAAAATAGTGGTCTCATTAATCACTGAATGTGATGAAGTTTTATGTCGCTTCCTAC
CTTGCTCTAAAGAATTTTGTCATTAAAGGCCATATTATTTTCTCTGAGCAGTTTCCATTG
TAAGGTTGAATATCTTTTTCTTCATTCAAATCATCATTATAGGTTAAGTTAATCAAATAG
GAGTTAAAATAAGTTATATTTGATCTTTTTTCCCTGAAAATAATGGTGAACCTATTGTCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-420, gnl|bosTau2|chr11 (73227964-73227554)
               

               
               5-420, gnl|Hg17|chr9 (124785948-124785525)
               

               
               5-420, gnl|Mm7|chr2 (39074978-39074566)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-420, gnl|bosTau2|chr11 (73227964-73227554)
               

               
               5-420, gnl|Hg17|chr9 (124785948-124785525)
               

               
               5-420, gnl|Mm7|chr2 (39074978-39074566)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tbr (0.154178)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.154178)

	5-420, gnl\|bosTau2\|chr11 (73227964-73227554)
	5-420, gnl\|Hg17\|chr9 (124785948-124785525)
	5-420, gnl\|Mm7\|chr2 (39074978-39074566)