Non-Coding RNA Search

Ss1.1-Pla1-C0000037_E20.5

Sequence:


               
               GTGGCATTAATGAGAAAAGAAATCATATTTATAATGCTATTTCCTATCATGCCTTTTTCT
CTTCTTCTCTCCTCCGACCACCTTCCCACCCCGATTCCTCCACATGAGACACACACACAC
ACACACACACACACACACAGAGTCACTTAAAAATGAATTTTTTGAATAACTGTTTTGAAT
TCAAATTCAATTCAGGGGCTGCTGATGTCAATATAGTATTTTCAAAGTATTTTGTTGTAG
CCTGTGTAAATACTATACCATTTACAGGGTTTGGGGTTGTAGAATTTAAACTGGAAGATC
GGACTCCCCAGATCTCAGGACGGCAACAGTCCAGGCCAGTTTTACACCCATCTGGCTGTA
CACTAACTGATGATCATTCATTAAGATTGCTTACCGTAATGTTCCTGGAAAAAATCTTTT
TGCCCATTTATTATTTTCATAGGCAGTCATCTGTGTATAACATACTACATCAGCCTGGCT
TCTAAATTTTTTTTTTTTTTTTAGGGCCAAACCCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGCATTAATGAGAAAAGAAATCATATTTATAATGCTATTTCCTATCATGCCTTTTTCT
CTTCTTCTCTCCTCCGACCACCTTCCCACCCCGATTCCTCCACATGAGACACACACACAC
ACACACACACACACACACAGAGTCACTTAAAAATGAATTTTTTGAATAACTGTTTTGAAT
TCAAATTCAATTCAGGGGCTGCTGATGTCAATATAGTATTTTCAAAGTATTTTGTTGTAG
CCTGTGTAAATACTATACCATTTACAGGGTTTGGGGTTGTAGAATTTAAACTGGAAGATC
GGACTCCCCAGATCTCAGGACGGCAACAGTCCAGGCCAGTTTTACACCCATCTGGCTGTA
CACTAACTGATGATCATTCATTAAGATTGCTTACCGTAATGTTCCTGGAAAAAATCTTTT
TGCCCATTTATTATTTTCATAGGCAGTCATCTGTGTATAACATACTACATCAGCCTGGCT
TCTAAATTTTTTTTTTTTTTTTAGGGCCAAACCCAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               127-503, gnl|bosTau2|chr6 (53224889-53225273)
               

               
               127-503, gnl|Hg17|chr4 (82334632-82335215)
               

               
               127-503, gnl|Mm7|chr5 (98097476-98098221)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               127-503, gnl|bosTau2|chr6 (53224889-53225273)
               

               
               127-503, gnl|Hg17|chr4 (82334632-82335215)
               

               
               127-503, gnl|Mm7|chr5 (98097476-98098221)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)

	127-503, gnl\|bosTau2\|chr6 (53224889-53225273)
	127-503, gnl\|Hg17\|chr4 (82334632-82335215)
	127-503, gnl\|Mm7\|chr5 (98097476-98098221)