Ss1.1-Pla1-C0000042_A07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCATTCATCCCGGTCAATTTTGGTTTCAGGTCGTGGCGGCTGGTGGTCAGGGGGAGTTGG AGAGAGGTTCGCCCCGTCTGCATCCCTGCCCGTCGGGACCTGGTGGACAGTCCAGCCTCC TTGGCCTCCAGCCTTGGCTCACCTCTCCCCAGAGCCAAGGAGCTTGTCCTGAATGATCTT CCCGCTAGCACCCCTGCCTCCAAGTCCTGCGACTCCTCCCCGCCCGAGGACGCATCTACC CCTGGGCCCAGCTCGGCCAGTCACCTCCGCCAGCTCGCAGCCAAGCCAGCGCCTTCCACG GACAGTATTGCCTTGAGGAGTCCCTTGACCCTGTCCAGTCCCTTTACCACGTCCTTCAGC CTGGGCTCGCACAGCGCCCTTAATGGGGACCTCTCTGTGCCCAGCTCCTACGTTAGCCTC CACCTGTCCCCCCAGGTCAGCGGCTCTGTGGTGTATGGACGCTCCCCCATGATGGCATTT GAGTCTCATCCACATCTCCGAGGGTCATCCATTTCTTCTTCCCTGCCCACCATCCCTGGG GGAAAGCCGGCCTACTCCTTCCACGTGTCTGCGGACGGGCAGATGCAGCCCGTGCCCTTC CCGTCCGACGCGCTGGTGGGCGCAGGCATCCCGCGGCACGCGCGGCAGCTACACACGCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCATTCATCCCGGTCAATTTTGGTTTCAGGTCGTGGCGGCTGGTGGTCAGGGGGAGTTGG AGAGAGGTTCGCCCCGTCTGCATCCCTGCCCGTCGGGACCTGGTGGACAGTCCAGCCTCC TTGGCCTCCAGCCTTGGCTCACCTCTCCCCAGAGCCAAGGAGCTTGTCCTGAATGATCTT CCCGCTAGCACCCCTGCCTCCAAGTCCTGCGACTCCTCCCCGCCCGAGGACGCATCTACC CCTGGGCCCAGCTCGGCCAGTCACCTCCGCCAGCTCGCAGCCAAGCCAGCGCCTTCCACG GACAGTATTGCCTTGAGGAGTCCCTTGACCCTGTCCAGTCCCTTTACCACGTCCTTCAGC CTGGGCTCGCACAGCGCCCTTAATGGGGACCTCTCTGTGCCCAGCTCCTACGTTAGCCTC CACCTGTCCCCCCAGGTCAGCGGCTCTGTGGTGTATGGACGCTCCCCCATGATGGCATTT GAGTCTCATCCACATCTCCGAGGGTCATCCATTTCTTCTTCCCTGCCCACCATCCCTGGG GGAAAGCCGGCCTACTCCTTCCACGTGTCTGCGGACGGGCAGATGCAGCCCGTGCCCTTC CCGTCCGACGCGCTGGTGGGCGCAGGCATCCCGCGGCACGCGCGGCAGCTACACACGCTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 310-474, gnl|bosTau2|chr7 (16522558-16522394) | |
| 310-474, gnl|Hg17|chr19 (2960701-2960537) | |
| 310-474, gnl|Mm7|chr10 (81381293-81381457) | |
| 549-660, gnl|bosTau2|chr7 (16520462-16520351) | |
| 549-660, gnl|canFam2|chr20 (59293531-59293263) | |
| 549-660, gnl|danRer3|chr22 (18935499-18935244) | |
| 549-660, gnl|dasNov1|scaffold_175079 (1903-1634) | |
| 549-660, gnl|echTel1|scaffold_282689 (77707-77460) | |
| 549-660, gnl|fr1|chrUn (175444572-175444309) | |
| 549-660, gnl|galGal2|chr10 (20134097-20134373) | |
| 549-660, gnl|hg17|chr19 (2957419-2957688) | |
| 549-660, gnl|Hg17|chr19 (2957667-2957556) | |
| 549-660, gnl|loxAfr1|scaffold_48315 (517-766) | |
| 549-660, gnl|mm7|chr10 (81382535-81382266) | |
| 549-660, gnl|Mm7|chr10 (81382285-81382396) | |
| 549-660, gnl|monDom2|scaffold_461 (35653-35377) | |
| 549-660, gnl|oryCun1|scaffold_104340 (11981-11729) | |
| 549-660, gnl|panTro1|chr20_random (10532635-10532904) | |
| 549-660, gnl|rheMac2|chr19 (2843163-2842892) | |
| 549-660, gnl|rn3|chr7 (9595499-9595768) | |
| 549-660, gnl|tetNig1|chr1 (10423328-10423598) | |
| 549-660, gnl|xenTro1|scaffold_320 (1048583-1048334) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 310-474, gnl|bosTau2|chr7 (16522558-16522394) | |
| 310-474, gnl|Hg17|chr19 (2960701-2960537) | |
| 310-474, gnl|Mm7|chr10 (81381293-81381457) | |
| 549-660, gnl|bosTau2|chr7 (16520462-16520351) | |
| 549-660, gnl|canFam2|chr20 (59293531-59293263) | |
| 549-660, gnl|danRer3|chr22 (18935499-18935244) | |
| 549-660, gnl|dasNov1|scaffold_175079 (1903-1634) | |
| 549-660, gnl|echTel1|scaffold_282689 (77707-77460) | |
| 549-660, gnl|fr1|chrUn (175444572-175444309) | |
| 549-660, gnl|galGal2|chr10 (20134097-20134373) | |
| 549-660, gnl|hg17|chr19 (2957419-2957688) | |
| 549-660, gnl|Hg17|chr19 (2957667-2957556) | |
| 549-660, gnl|loxAfr1|scaffold_48315 (517-766) | |
| 549-660, gnl|mm7|chr10 (81382535-81382266) | |
| 549-660, gnl|Mm7|chr10 (81382285-81382396) | |
| 549-660, gnl|monDom2|scaffold_461 (35653-35377) | |
| 549-660, gnl|oryCun1|scaffold_104340 (11981-11729) | |
| 549-660, gnl|panTro1|chr20_random (10532635-10532904) | |
| 549-660, gnl|rheMac2|chr19 (2843163-2842892) | |
| 549-660, gnl|rn3|chr7 (9595499-9595768) | |
| 549-660, gnl|tetNig1|chr1 (10423328-10423598) | |
| 549-660, gnl|xenTro1|scaffold_320 (1048583-1048334) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nmm (0.132802) |