Ss1.1-Pla1-C0000042_H04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCCGCGGCTCGAGCAGCTCGGGCAGATCCATTACGTCTTCTCGGATAAGACAGGGACAC TCACACAGAACATCATGACCTTTAAAAAGTGCTGCATCAACGGGCAAATTTATGGAGACC ATCGGGATGCTTCTCAGCACAATCATAGCAAAATAGAGCAAGTGGATTTCAGCTGGAACA TGTATGCCGACGGGAAGCTTGCATTTTACGACCATTATCTCATTGAGCAAATCCAGTCGG GGAAGGAGCCGGAAGTGCGACAGTTCTTCTTCCTGCTGGCGGTGTGCCACACGGTCATGG TGGACAGGTTGGACAGTCAGCTCAATTACCAGGCAGCCTCTCCTGATGAAGGCGCTCTGG TAAACGCCGCCAGGAACTTCGGCTTTGCCTTCCTCGCCAGGACCCAGAACACGATCACCA TCAGCGAGTTGGGCACCGAGAGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCCGCGGCTCGAGCAGCTCGGGCAGATCCATTACGTCTTCTCGGATAAGACAGGGACAC TCACACAGAACATCATGACCTTTAAAAAGTGCTGCATCAACGGGCAAATTTATGGAGACC ATCGGGATGCTTCTCAGCACAATCATAGCAAAATAGAGCAAGTGGATTTCAGCTGGAACA TGTATGCCGACGGGAAGCTTGCATTTTACGACCATTATCTCATTGAGCAAATCCAGTCGG GGAAGGAGCCGGAAGTGCGACAGTTCTTCTTCCTGCTGGCGGTGTGCCACACGGTCATGG TGGACAGGTTGGACAGTCAGCTCAATTACCAGGCAGCCTCTCCTGATGAAGGCGCTCTGG TAAACGCCGCCAGGAACTTCGGCTTTGCCTTCCTCGCCAGGACCCAGAACACGATCACCA TCAGCGAGTTGGGCACCGAGAGGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 70 entry(ies) | More info |
| Aligned organism(s): 70 entry(ies) | Help | Less info |
| 12-121, gnl|bosTau2|chr24 (43025081-43025190) | |
| 12-121, gnl|canFam2|chr1 (21255262-21255132) | |
| 12-121, gnl|canFam2|chr20 (60291407-60291253) | |
| 12-121, gnl|canFam2|chr7 (45923335-45923207) | |
| 12-121, gnl|danRer3|chr16 (22294071-22293980) | |
| 12-121, gnl|danRer3|chr17 (37746956-37746829) | |
| 12-121, gnl|danRer3|chr22 (21744072-21744225) | |
| 12-121, gnl|dasNov1|scaffold_112979 (2151-2245) | |
| 12-121, gnl|dasNov1|scaffold_14939 (12005-12135) | |
| 12-121, gnl|dasNov1|scaffold_14939 (12007-12162) | |
| 12-121, gnl|echTel1|scaffold_299623 (804-938) | |
| 12-121, gnl|echTel1|scaffold_299623 (904-744) | |
| 12-121, gnl|echTel1|scaffold_300822 (5760-5630) | |
| 12-121, gnl|fr1|chrUn (199531732-199531630) | |
| 12-121, gnl|fr1|chrUn (254299269-254299399) | |
| 12-121, gnl|fr1|chrUn (177605542-177605693) | |
| 12-121, gnl|galGal2|chr10 (3508634-3508744) | |
| 12-121, gnl|galGal2|chr10 (3508730-3508574) | |
| 12-121, gnl|galGal2|chrUn (5182681-5182811) | |
| 12-121, gnl|hg17|chr1 (151126523-151126655) | |
| 12-121, gnl|hg17|chr18 (53506522-53506652) | |
| 12-121, gnl|Hg17|chr18 (53506631-53506522) | |
| 12-121, gnl|hg17|chr19 (1750933-1751096) | |
| 12-121, gnl|loxAfr1|scaffold_40916 (4022-4156) | |
| 12-121, gnl|loxAfr1|scaffold_40916 (4122-3962) | |
| 12-121, gnl|loxAfr1|scaffold_4675 (25412-25281) | |
| 12-121, gnl|mm7|chr10 (80318616-80318777) | |
| 12-121, gnl|mm7|chr18 (64952749-64952879) | |
| 12-121, gnl|Mm7|chr18 (64952858-64952751) | |
| 12-121, gnl|mm7|chr3 (90076282-90076170) | |
| 12-121, gnl|monDom2|scaffold_20 (44556894-44556764) | |
| 12-121, gnl|monDom2|scaffold_59 (3730268-3730148) | |
| 12-121, gnl|monDom2|scaffold_75 (2745698-2745866) | |
| 12-121, gnl|oryCun1|scaffold_177762 (4176-4090) | |
| 12-121, gnl|oryCun1|scaffold_198800 (29013-29143) | |
| 12-121, gnl|oryCun1|scaffold_198800 (29019-29170) | |
| 12-121, gnl|panTro1|chr1 (133118404-133118536) | |
| 12-121, gnl|panTro1|chr17 (50397047-50397177) | |
| 12-121, gnl|panTro1|chr20 (1830437-1830600) | |
| 12-121, gnl|rheMac2|chr1 (132878272-132878404) | |
| 12-121, gnl|rheMac2|chr1 (132878367-132878212) | |
| 12-121, gnl|rheMac2|chr18 (50943915-50944045) | |
| 12-121, gnl|rn3|chr18 (60862039-60862169) | |
| 12-121, gnl|rn3|chr2 (182120691-182120557) | |
| 12-121, gnl|rn3|chr7 (10695202-10695040) | |
| 12-121, gnl|tetNig1|chr8 (7682067-7681976) | |
| 12-121, gnl|tetNig1|chrUn_random (82532794-82532924) | |
| 12-121, gnl|tetNig1|chrUn_random (82532798-82532930) | |
| 12-121, gnl|xenTro1|scaffold_242 (176090-176241) | |
| 12-121, gnl|xenTro1|scaffold_431 (5102-4972) | |
| 12-121, gnl|xenTro1|scaffold_611 (744184-744090) | |
| 157-320, gnl|bosTau2|chr24 (43027484-43027647) | |
| 157-320, gnl|canFam2|chr1 (21258318-21258201) | |
| 157-320, gnl|danRer3|chr17 (37753983-37753866) | |
| 157-320, gnl|dasNov1|scaffold_14939 (10948-11065) | |
| 157-320, gnl|echTel1|scaffold_30095 (304-187) | |
| 157-320, gnl|fr1|chrUn (254297651-254297767) | |
| 157-320, gnl|galGal2|chrZ_random (8303160-8303043) | |
| 157-320, gnl|hg17|chr18 (53502262-53502379) | |
| 157-320, gnl|Hg17|chr18 (53502424-53502261) | |
| 157-320, gnl|loxAfr1|scaffold_4675 (28943-28826) | |
| 157-320, gnl|mm7|chr18 (64949989-64950106) | |
| 157-320, gnl|Mm7|chr18 (64950151-64949988) | |
| 157-320, gnl|monDom2|scaffold_20 (44557739-44557622) | |
| 157-320, gnl|oryCun1|scaffold_175409 (69425-69308) | |
| 157-320, gnl|panTro1|chr17 (50392671-50392788) | |
| 157-320, gnl|rheMac2|chr18 (50939411-50939528) | |
| 157-320, gnl|rn3|chr18 (60858998-60859115) | |
| 157-320, gnl|tetNig1|chrUn_random (82532071-82532188) | |
| 157-320, gnl|xenTro1|scaffold_431 (6549-6432) |
| Aligned organism(s): 70 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 12-121, gnl|bosTau2|chr24 (43025081-43025190) | |
| 12-121, gnl|canFam2|chr1 (21255262-21255132) | |
| 12-121, gnl|canFam2|chr20 (60291407-60291253) | |
| 12-121, gnl|canFam2|chr7 (45923335-45923207) | |
| 12-121, gnl|danRer3|chr16 (22294071-22293980) | |
| 12-121, gnl|danRer3|chr17 (37746956-37746829) | |
| 12-121, gnl|danRer3|chr22 (21744072-21744225) | |
| 12-121, gnl|dasNov1|scaffold_112979 (2151-2245) | |
| 12-121, gnl|dasNov1|scaffold_14939 (12005-12135) | |
| 12-121, gnl|dasNov1|scaffold_14939 (12007-12162) | |
| 12-121, gnl|echTel1|scaffold_299623 (804-938) | |
| 12-121, gnl|echTel1|scaffold_299623 (904-744) | |
| 12-121, gnl|echTel1|scaffold_300822 (5760-5630) | |
| 12-121, gnl|fr1|chrUn (199531732-199531630) | |
| 12-121, gnl|fr1|chrUn (254299269-254299399) | |
| 12-121, gnl|fr1|chrUn (177605542-177605693) | |
| 12-121, gnl|galGal2|chr10 (3508634-3508744) | |
| 12-121, gnl|galGal2|chr10 (3508730-3508574) | |
| 12-121, gnl|galGal2|chrUn (5182681-5182811) | |
| 12-121, gnl|hg17|chr1 (151126523-151126655) | |
| 12-121, gnl|hg17|chr18 (53506522-53506652) | |
| 12-121, gnl|Hg17|chr18 (53506631-53506522) | |
| 12-121, gnl|hg17|chr19 (1750933-1751096) | |
| 12-121, gnl|loxAfr1|scaffold_40916 (4022-4156) | |
| 12-121, gnl|loxAfr1|scaffold_40916 (4122-3962) | |
| 12-121, gnl|loxAfr1|scaffold_4675 (25412-25281) | |
| 12-121, gnl|mm7|chr10 (80318616-80318777) | |
| 12-121, gnl|mm7|chr18 (64952749-64952879) | |
| 12-121, gnl|Mm7|chr18 (64952858-64952751) | |
| 12-121, gnl|mm7|chr3 (90076282-90076170) | |
| 12-121, gnl|monDom2|scaffold_20 (44556894-44556764) | |
| 12-121, gnl|monDom2|scaffold_59 (3730268-3730148) | |
| 12-121, gnl|monDom2|scaffold_75 (2745698-2745866) | |
| 12-121, gnl|oryCun1|scaffold_177762 (4176-4090) | |
| 12-121, gnl|oryCun1|scaffold_198800 (29013-29143) | |
| 12-121, gnl|oryCun1|scaffold_198800 (29019-29170) | |
| 12-121, gnl|panTro1|chr1 (133118404-133118536) | |
| 12-121, gnl|panTro1|chr17 (50397047-50397177) | |
| 12-121, gnl|panTro1|chr20 (1830437-1830600) | |
| 12-121, gnl|rheMac2|chr1 (132878272-132878404) | |
| 12-121, gnl|rheMac2|chr1 (132878367-132878212) | |
| 12-121, gnl|rheMac2|chr18 (50943915-50944045) | |
| 12-121, gnl|rn3|chr18 (60862039-60862169) | |
| 12-121, gnl|rn3|chr2 (182120691-182120557) | |
| 12-121, gnl|rn3|chr7 (10695202-10695040) | |
| 12-121, gnl|tetNig1|chr8 (7682067-7681976) | |
| 12-121, gnl|tetNig1|chrUn_random (82532794-82532924) | |
| 12-121, gnl|tetNig1|chrUn_random (82532798-82532930) | |
| 12-121, gnl|xenTro1|scaffold_242 (176090-176241) | |
| 12-121, gnl|xenTro1|scaffold_431 (5102-4972) | |
| 12-121, gnl|xenTro1|scaffold_611 (744184-744090) | |
| 157-320, gnl|bosTau2|chr24 (43027484-43027647) | |
| 157-320, gnl|canFam2|chr1 (21258318-21258201) | |
| 157-320, gnl|danRer3|chr17 (37753983-37753866) | |
| 157-320, gnl|dasNov1|scaffold_14939 (10948-11065) | |
| 157-320, gnl|echTel1|scaffold_30095 (304-187) | |
| 157-320, gnl|fr1|chrUn (254297651-254297767) | |
| 157-320, gnl|galGal2|chrZ_random (8303160-8303043) | |
| 157-320, gnl|hg17|chr18 (53502262-53502379) | |
| 157-320, gnl|Hg17|chr18 (53502424-53502261) | |
| 157-320, gnl|loxAfr1|scaffold_4675 (28943-28826) | |
| 157-320, gnl|mm7|chr18 (64949989-64950106) | |
| 157-320, gnl|Mm7|chr18 (64950151-64949988) | |
| 157-320, gnl|monDom2|scaffold_20 (44557739-44557622) | |
| 157-320, gnl|oryCun1|scaffold_175409 (69425-69308) | |
| 157-320, gnl|panTro1|chr17 (50392671-50392788) | |
| 157-320, gnl|rheMac2|chr18 (50939411-50939528) | |
| 157-320, gnl|rn3|chr18 (60858998-60859115) | |
| 157-320, gnl|tetNig1|chrUn_random (82532071-82532188) | |
| 157-320, gnl|xenTro1|scaffold_431 (6549-6432) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nco (0.161734) |