Non-Coding RNA Search

Ss1.1-Pla1-C0000046_M13.5

Sequence:


               
               AGCAGATGCTTGTCTTATCAAGTAGAAGTCAATAACACCCAGGCTAAGACACATGATATT
TTCTATGTTGAAGAGGCCAAATGTCAGAATTCAGAATTTGAAGGGAACCTAGAGGGTATG
ATTTGTTTCATGGTCCCCGGTGTTCTTCCTGATACTTTGAACACAGTCAGAATAAGAGTC
AAAACAAATAAGTTATGCTATGAAGATGACAAGCTCTGGAGTAATGGGAGTCAAGCGATG
AGTATAGGTCAAAAGGCCAATCCAACATTCTACATAACCACATGGCTCATCATTCCAGTC
ATTGTTGCAGCTGCAATTATAGTCCTTCTGCTGTATCTGAAAAGGCTCAAGATCATTATA
TTCCCTCCAATTCCTGATCCTGGCAAAATTTTTAAAGAAATGTTTGGAGACCAGAATGAT
GATACCCTGCACTGGAAGAAGTACGACATCTATGAGAAGCAAACCAAAGAAGAAACTGAC
TCTGTAGTGCTGATAGAAAGCCTGAAGAGAGCCGCTCAGTGATGGGGATAATTTATTTTA
ACCTTCAATGTGACCTTGTGAAGATTCATTTCGTTCTCCATTTGGTATCCGGGAACTTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCAGATGCTTGTCTTATCAAGTAGAAGTCAATAACACCCAGGCTAAGACACATGATATT
TTCTATGTTGAAGAGGCCAAATGTCAGAATTCAGAATTTGAAGGGAACCTAGAGGGTATG
ATTTGTTTCATGGTCCCCGGTGTTCTTCCTGATACTTTGAACACAGTCAGAATAAGAGTC
AAAACAAATAAGTTATGCTATGAAGATGACAAGCTCTGGAGTAATGGGAGTCAAGCGATG
AGTATAGGTCAAAAGGCCAATCCAACATTCTACATAACCACATGGCTCATCATTCCAGTC
ATTGTTGCAGCTGCAATTATAGTCCTTCTGCTGTATCTGAAAAGGCTCAAGATCATTATA
TTCCCTCCAATTCCTGATCCTGGCAAAATTTTTAAAGAAATGTTTGGAGACCAGAATGAT
GATACCCTGCACTGGAAGAAGTACGACATCTATGAGAAGCAAACCAAAGAAGAAACTGAC
TCTGTAGTGCTGATAGAAAGCCTGAAGAGAGCCGCTCAGTGATGGGGATAATTTATTTTA
ACCTTCAATGTGACCTTGTGAAGATTCATTTCGTTCTCCATTTGGTATCCGGGAACTTGT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|57112337|ref|XP_538150.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|57112337|ref|XP_538150.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               426-600, gnl|bosTau2|chrX (964938-964764)
               

               
               426-600, gnl|Hg17|chrX (117707603-117707777)
               

               
               426-600, gnl|Mm7|chrX (30928573-30928752)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               426-600, gnl|bosTau2|chrX (964938-964764)
               

               
               426-600, gnl|Hg17|chrX (117707603-117707777)
               

               
               426-600, gnl|Mm7|chrX (30928573-30928752)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ese (0.126502)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)

	426-600, gnl\|bosTau2\|chrX (964938-964764)
	426-600, gnl\|Hg17\|chrX (117707603-117707777)
	426-600, gnl\|Mm7\|chrX (30928573-30928752)