Non-Coding RNA Search

Ss1.1-Pla1-C0000048_M07.5

Sequence:


               
               TTTAGTTCTGTCTTCCATAGGACAAGATAAGGACGACATACCTCATTCCTTGGGCTATTG
CTGTAGTCACACATTCATGATTATGAATTTGAAAGTAAATACTAATTATGGAAATAGTGC
TATAGGTTTGCCATGCATGAAACACGATTTTAATTGGTTTAAAGTCCCTTCGTATCAAGT
GCTCCTTGATTTCCTTTAAAGGAAAACATACATGTTCCTTGAGTTATAGGACATTTTATT
AATTCCAAAAAACGCAATCACTTTAAATTATGTAAGTATAAGATTAGTCCCTTGGATAAA
TGCCAAGCTAATTTGTTTCATATTATTAAAATTTTGGCACTGTAGGAGATCCCAGGTGGC
TCAGCAGATGAAGGATCCGCATTGTCACTGCTGTGGCTCTGGTTGCTGCCGTGGCATGGG
TTCAATCCCTGGCCCGGGAACTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAGTTCTGTCTTCCATAGGACAAGATAAGGACGACATACCTCATTCCTTGGGCTATTG
CTGTAGTCACACATTCATGATTATGAATTTGAAAGTAAATACTAATTATGGAAATAGTGC
TATAGGTTTGCCATGCATGAAACACGATTTTAATTGGTTTAAAGTCCCTTCGTATCAAGT
GCTCCTTGATTTCCTTTAAAGGAAAACATACATGTTCCTTGAGTTATAGGACATTTTATT
AATTCCAAAAAACGCAATCACTTTAAATTATGTAAGTATAAGATTAGTCCCTTGGATAAA
TGCCAAGCTAATTTGTTTCATATTATTAAAATTTTGGCACTGTAGGAGATCCCAGGTGGC
TCAGCAGATGAAGGATCCGCATTGTCACTGCTGTGGCTCTGGTTGCTGCCGTGGCATGGG
TTCAATCCCTGGCCCGGGAACTTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-359, gnl|bosTau2|chr19 (15147160-15147510)
               

               
               1-359, gnl|Hg17|chr17 (5228658-5229010)
               

               
               1-359, gnl|Mm7|chr11 (71023394-71023693)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-359, gnl|bosTau2|chr19 (15147160-15147510)
               

               
               1-359, gnl|Hg17|chr17 (5228658-5229010)
               

               
               1-359, gnl|Mm7|chr11 (71023394-71023693)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               sin (0.174948)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)

	1-359, gnl\|bosTau2\|chr19 (15147160-15147510)
	1-359, gnl\|Hg17\|chr17 (5228658-5229010)
	1-359, gnl\|Mm7\|chr11 (71023394-71023693)