Ss1.1-Pla1-C0000934_H01.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCTCCTGCTGCTCCTCTCCTCCCGGGGTGGCGGCGGGGGAGCCGGCGGCTGCGGAGCGC TGACTGCCGGCTGCTTCCCCGCGCTGGGCGTCAGCCGCCACCGGCAGCAGCAGCAGCACC ACCGGACGGTGCACCAGCGGCTCTCTTCTTGGCAGAATTTGGGAGTCGTTTATTGCAGTA CTGTTGTGCCCTCTGATGATGTAACAGTGGTGTATCAAAATGGGTTACCTGTGATATCTG TGAGACTACCATCCCGGCGTGAACGCTGCCAGTTTACACTCAAACCCATCTCAGACTCTG TTGGTGTGTTTTTACGACAACTGCAAGAAGAAGATCGGGGAATTGACAGAGTTGCAATCT ATTCACCAGATGGCGTACGAGTTGTTTACAAAATCAATCAATCTTGCCTGTTGATTTTCC TGCCCCTGATGTTATAGAACAGGGATTGGCAAATTGCAGCTGAGACCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCTCCTGCTGCTCCTCTCCTCCCGGGGTGGCGGCGGGGGAGCCGGCGGCTGCGGAGCGC TGACTGCCGGCTGCTTCCCCGCGCTGGGCGTCAGCCGCCACCGGCAGCAGCAGCAGCACC ACCGGACGGTGCACCAGCGGCTCTCTTCTTGGCAGAATTTGGGAGTCGTTTATTGCAGTA CTGTTGTGCCCTCTGATGATGTAACAGTGGTGTATCAAAATGGGTTACCTGTGATATCTG TGAGACTACCATCCCGGCGTGAACGCTGCCAGTTTACACTCAAACCCATCTCAGACTCTG TTGGTGTGTTTTTACGACAACTGCAAGAAGAAGATCGGGGAATTGACAGAGTTGCAATCT ATTCACCAGATGGCGTACGAGTTGTTTACAAAATCAATCAATCTTGCCTGTTGATTTTCC TGCCCCTGATGTTATAGAACAGGGATTGGCAAATTGCAGCTGAGACCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 1-139, gnl|bosTau2|chr28 (23646408-23646546) | |
| 1-139, gnl|canFam2|chr4 (26520301-26520510) | |
| 1-139, gnl|echTel1|scaffold_190401 (4577-4793) | |
| 1-139, gnl|hg17|chr10 (74121862-74122074) | |
| 1-139, gnl|Hg17|chr10 (74121938-74122076) | |
| 1-139, gnl|loxAfr1|scaffold_47285 (7408-7166) | |
| 1-139, gnl|mm7|chr10 (59134921-59134712) | |
| 1-139, gnl|Mm7|chr10 (59134843-59134709) | |
| 1-139, gnl|monDom2|scaffold_14 (779561-779770) | |
| 1-139, gnl|oryCun1|scaffold_195201 (20990-21199) | |
| 1-139, gnl|panTro1|chr8_random (39566192-39566407) | |
| 1-139, gnl|rn3|chrUn_random (4606214-4606423) | |
| 1-139, gnl|xenTro1|scaffold_171 (944510-944333) | |
| 198-369, gnl|bosTau2|chr28 (23808957-23809128) | |
| 198-369, gnl|canFam2|chr4 (26695560-26695754) | |
| 198-369, gnl|danRer3|chrNA (144283818-144284010) | |
| 198-369, gnl|dasNov1|scaffold_9112 (139-333) | |
| 198-369, gnl|echTel1|scaffold_314030 (39468-39274) | |
| 198-369, gnl|fr1|chrUn (244800956-244801138) | |
| 198-369, gnl|galGal2|chr6 (10551209-10551015) | |
| 198-369, gnl|hg17|chr10 (74288930-74289124) | |
| 198-369, gnl|Hg17|chr10 (74288940-74289111) | |
| 198-369, gnl|loxAfr1|scaffold_30458 (10759-10566) | |
| 198-369, gnl|mm7|chr10 (58986003-58985810) | |
| 198-369, gnl|Mm7|chr10 (58985992-58985821) | |
| 198-369, gnl|monDom2|scaffold_14 (919527-919719) | |
| 198-369, gnl|oryCun1|scaffold_207615 (90265-90451) | |
| 198-369, gnl|panTro1|chr8_random (39739289-39739483) | |
| 198-369, gnl|rheMac2|chr9 (64082440-64082246) | |
| 198-369, gnl|rn3|chrUn (14989274-14989467) | |
| 198-369, gnl|tetNig1|chr17 (3140824-3141007) | |
| 198-369, gnl|xenTro1|scaffold_171 (898355-898170) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-139, gnl|bosTau2|chr28 (23646408-23646546) | |
| 1-139, gnl|canFam2|chr4 (26520301-26520510) | |
| 1-139, gnl|echTel1|scaffold_190401 (4577-4793) | |
| 1-139, gnl|hg17|chr10 (74121862-74122074) | |
| 1-139, gnl|Hg17|chr10 (74121938-74122076) | |
| 1-139, gnl|loxAfr1|scaffold_47285 (7408-7166) | |
| 1-139, gnl|mm7|chr10 (59134921-59134712) | |
| 1-139, gnl|Mm7|chr10 (59134843-59134709) | |
| 1-139, gnl|monDom2|scaffold_14 (779561-779770) | |
| 1-139, gnl|oryCun1|scaffold_195201 (20990-21199) | |
| 1-139, gnl|panTro1|chr8_random (39566192-39566407) | |
| 1-139, gnl|rn3|chrUn_random (4606214-4606423) | |
| 1-139, gnl|xenTro1|scaffold_171 (944510-944333) | |
| 198-369, gnl|bosTau2|chr28 (23808957-23809128) | |
| 198-369, gnl|canFam2|chr4 (26695560-26695754) | |
| 198-369, gnl|danRer3|chrNA (144283818-144284010) | |
| 198-369, gnl|dasNov1|scaffold_9112 (139-333) | |
| 198-369, gnl|echTel1|scaffold_314030 (39468-39274) | |
| 198-369, gnl|fr1|chrUn (244800956-244801138) | |
| 198-369, gnl|galGal2|chr6 (10551209-10551015) | |
| 198-369, gnl|hg17|chr10 (74288930-74289124) | |
| 198-369, gnl|Hg17|chr10 (74288940-74289111) | |
| 198-369, gnl|loxAfr1|scaffold_30458 (10759-10566) | |
| 198-369, gnl|mm7|chr10 (58986003-58985810) | |
| 198-369, gnl|Mm7|chr10 (58985992-58985821) | |
| 198-369, gnl|monDom2|scaffold_14 (919527-919719) | |
| 198-369, gnl|oryCun1|scaffold_207615 (90265-90451) | |
| 198-369, gnl|panTro1|chr8_random (39739289-39739483) | |
| 198-369, gnl|rheMac2|chr9 (64082440-64082246) | |
| 198-369, gnl|rn3|chrUn (14989274-14989467) | |
| 198-369, gnl|tetNig1|chr17 (3140824-3141007) | |
| 198-369, gnl|xenTro1|scaffold_171 (898355-898170) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ute (0.132784) | |
| eep (0.122564) |