Non-Coding RNA Search

Ss1.1-Pla1-C0000936_H06.5

Sequence:


               
               CCAGTTCAGATTTATAAGACTGCTTTTATTGAATTGAATATATTAACATTTTTATATATT
TTCTTTATTGTATATCTGTTTTATAGGTATATGCTTGTCAGCATTGCCAAGTGGCAAAAA
ATACGGTAATTCTAGCACCTAAACAGCATCTTCTCAAGGTAGAGAATCCATGGAGTATAG
TTACTGTTGATCTGATGGGCCCATTTCATATGAGCAGCAGAAGTCATGTATATGCTATAA
TCATGACAGATCTGTTCACAAAATGGGTTGTGATTTTGCCTCTGTGTGATGTTTCAGCAT
CAGAAGTTTCTAAAGCTATTACCAATATATTTTTCTTATATGGACCTCCTCAGAAAATAA
TAATGGACCAAAGAGATGAGTTCATTCATCAGATCAATCTTGAACTGTGTGAATTGTTTG
GCACAAAGCAAATTGTAATTTCTCAAGCCTCCCAAACTGTTAATCCAACTGAAAGTACAC
CTAGCACAATCAAAACATTTCTTTCCAAACACTGTGCTGACCACCCAGACAACTGGGATG
ATCATCTATCAGCTGTTTCATTTGCCTTCAATGTTATTCACTTGGAGCCTTCTAAAAATA
CACCATATTTTCAAATGTTTAATCGAAATCCTTACATGCCTGAGACTTCAGATATTCTTC
ATGAGATGGATGGTGATAGTACAAGTATGTTTGCCAAAATTCTAGGTGCAGTTAAAGAAG
CTGATAAAATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCAGTTCAGATTTATAAGACTGCTTTTATTGAATTGAATATATTAACATTTTTATATATT
TTCTTTATTGTATATCTGTTTTATAGGTATATGCTTGTCAGCATTGCCAAGTGGCAAAAA
ATACGGTAATTCTAGCACCTAAACAGCATCTTCTCAAGGTAGAGAATCCATGGAGTATAG
TTACTGTTGATCTGATGGGCCCATTTCATATGAGCAGCAGAAGTCATGTATATGCTATAA
TCATGACAGATCTGTTCACAAAATGGGTTGTGATTTTGCCTCTGTGTGATGTTTCAGCAT
CAGAAGTTTCTAAAGCTATTACCAATATATTTTTCTTATATGGACCTCCTCAGAAAATAA
TAATGGACCAAAGAGATGAGTTCATTCATCAGATCAATCTTGAACTGTGTGAATTGTTTG
GCACAAAGCAAATTGTAATTTCTCAAGCCTCCCAAACTGTTAATCCAACTGAAAGTACAC
CTAGCACAATCAAAACATTTCTTTCCAAACACTGTGCTGACCACCCAGACAACTGGGATG
ATCATCTATCAGCTGTTTCATTTGCCTTCAATGTTATTCACTTGGAGCCTTCTAAAAATA
CACCATATTTTCAAATGTTTAATCGAAATCCTTACATGCCTGAGACTTCAGATATTCTTC
ATGAGATGGATGGTGATAGTACAAGTATGTTTGCCAAAATTCTAGGTGCAGTTAAAGAAG
CTGATAAAATAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|7020019|dbj|BAA90963.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|7020019|dbj|BAA90963.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               86-732, gnl|bosTau2|chr15 (26711001-26711644)
               

               
               86-732, gnl|Hg17|chr5 (102470319-102460946)
               

               
               86-732, gnl|Mm7|chr1 (97635122-97637389)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               86-732, gnl|bosTau2|chr15 (26711001-26711644)
               

               
               86-732, gnl|Hg17|chr5 (102470319-102460946)
               

               
               86-732, gnl|Mm7|chr1 (97635122-97637389)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spl (0.143184)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               cty (0.10408)

	86-732, gnl\|bosTau2\|chr15 (26711001-26711644)
	86-732, gnl\|Hg17\|chr5 (102470319-102460946)
	86-732, gnl\|Mm7\|chr1 (97635122-97637389)