Non-Coding RNA Search

Ss1.1-Pla1-C0001061_B05.5

Sequence:


               
               GGGACCCATCAAGGCCAGGTGGCCGGTGCCAGCCGTGTGAGTGCAATGGGAACATTGATC
CCACGGACCCTGATGCCTGTGACCCCCACTCGGGGCAATGCCTGCGCTGCTTACACCACA
CAGAGGGGCCACACTGTGCCCACTGCAAGCCTGGCTTCCATGGGCAGGCTGCCCGACAGA
GCTGTCACCGCTGCAACTGCAACCTGCTGGGCACAGATCCCCAGCAGTGCCCATCCCCCG
ACCGGTGCAACTGTGACCAAAGCAGTGGGCAGTGCCCATGCCTCCCCAATGTCCAGGGAC
CTAGCTGTGACCGCTGTGCCCCCAACTTCTGGAACCTTACCAGTGGCCGTGGCTGCCAGC
CCTGTGCCTGCCACCCAAGCCGATCCAGAGGCCCCACCTGCAATGAATTCACAGGACAGT
GCCACTGCCGTACTGGCTTCGGTGGGCGAACCTGTTCTGAGTGCCAGGAGCTGCACTGGG
GAGACCCTGGTTTGCAGTGCCGTGCCTGTGATTGTGACCCTCGTGGGATAGACACACCTC
AGTGTCACCGTTCTACAGGCCACTGCAGCTGCCGCCCAGGCGTGTCTGGAGTGCGCTGTG
ACCAGTGCGCCCGTGGCTTCTCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGACCCATCAAGGCCAGGTGGCCGGTGCCAGCCGTGTGAGTGCAATGGGAACATTGATC
CCACGGACCCTGATGCCTGTGACCCCCACTCGGGGCAATGCCTGCGCTGCTTACACCACA
CAGAGGGGCCACACTGTGCCCACTGCAAGCCTGGCTTCCATGGGCAGGCTGCCCGACAGA
GCTGTCACCGCTGCAACTGCAACCTGCTGGGCACAGATCCCCAGCAGTGCCCATCCCCCG
ACCGGTGCAACTGTGACCAAAGCAGTGGGCAGTGCCCATGCCTCCCCAATGTCCAGGGAC
CTAGCTGTGACCGCTGTGCCCCCAACTTCTGGAACCTTACCAGTGGCCGTGGCTGCCAGC
CCTGTGCCTGCCACCCAAGCCGATCCAGAGGCCCCACCTGCAATGAATTCACAGGACAGT
GCCACTGCCGTACTGGCTTCGGTGGGCGAACCTGTTCTGAGTGCCAGGAGCTGCACTGGG
GAGACCCTGGTTTGCAGTGCCGTGCCTGTGATTGTGACCCTCGTGGGATAGACACACCTC
AGTGTCACCGTTCTACAGGCCACTGCAGCTGCCGCCCAGGCGTGTCTGGAGTGCGCTGTG
ACCAGTGCGCCCGTGGCTTCTCAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-190, gnl|bosTau2|chr22 (40092145-40091956)
               

               
               1-190, gnl|Hg17|chr3 (49137326-49137137)
               

               
               1-190, gnl|Mm7|chrUn_random (62102-62291)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-190, gnl|bosTau2|chr22 (40092145-40091956)
               

               
               1-190, gnl|Hg17|chr3 (49137326-49137137)
               

               
               1-190, gnl|Mm7|chrUn_random (62102-62291)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	1-190, gnl\|bosTau2\|chr22 (40092145-40091956)
	1-190, gnl\|Hg17\|chr3 (49137326-49137137)
	1-190, gnl\|Mm7\|chrUn_random (62102-62291)