Ss1.1-Pla1-C0001061_G04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGACGTTCCCGTGGTGTGGCGTCGGAGCGCCAGCCCCGCACCACACGTGGAGTGCTGTC GCTGCTTCCTAGGGCCTTCTCGGGACTGGACCCGCTTCCAGTACCATGGGGCGCAAATTG GACCCTACGAAAGAGAAACGCGGGCCGGGCCGAAAGGCCCGAAAGCAGAAAGGTGCTGAG ACCGAACTCGTCAGATTCTTGCCTGCAGCTGGTGATGAAAATCCCAAGAGGCTGTCCAGT CGTGCTCGAAAGAGGGCAGCCAAGAGGAGGTTGGGCTCTGCTGAAGTCCGTGAGACAAAT AAATCCCCTGGGGCCAGACCATTGCCTGGAAAGCTACCAAAAGGAGCCGTCCAGACACCG AGTAAGAAGGGAGCCCTGTCCTTATTTAATGCTGCTCAAGGCAAGAAGCGCCCAGCATCA GCCTATAGCAGTGAGGAGGAGGGAGAGGAGGAAGACTCTGAAGAGGGTGGTGTGGTGAAC GAGGGGGACCTCTGGGGCTCTGAGGACAGTGATGCCGATATGGTAGATGACTATGGAGCC AACTCCAGTTCAGAGGACGAAGAAGAGGATGACAGTGAAGAGTTGCTGCCCATTGAAAGG GCTGCTCGAAAGCAGAAGGCCCAGGAAGCTGTTACTGGGAGCCAGTGGAGTGAGGAGGAG ACTGAGGAAGAGGAGGAGGAATCCCCTGAGTCAGGCCCTAGAGAAGATGATGAGACAGAA GGGGGCCTCCAGATCAATGTGGATGAGGAGGAGCCTTTTGTACTGCCCCTTGCTGGAGAG ATGGAGCAGGATGCCCAGGCTCCAGACTTGCCGCGAGTTCACAAGCGCATCCAAGATATA GTGGGAGTGTTGCGTGATTTTGGGACTCAGCGGGAGGAGGGTCGGTCTCGTGCTGAATAT CTGCAGCGGCTTCGGAAGGATTTGGCCACTTATTACTCCTACGGAGACTTTCTCCTTGGC AAGCTCATGGACCTCTTCCCTCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGACGTTCCCGTGGTGTGGCGTCGGAGCGCCAGCCCCGCACCACACGTGGAGTGCTGTC GCTGCTTCCTAGGGCCTTCTCGGGACTGGACCCGCTTCCAGTACCATGGGGCGCAAATTG GACCCTACGAAAGAGAAACGCGGGCCGGGCCGAAAGGCCCGAAAGCAGAAAGGTGCTGAG ACCGAACTCGTCAGATTCTTGCCTGCAGCTGGTGATGAAAATCCCAAGAGGCTGTCCAGT CGTGCTCGAAAGAGGGCAGCCAAGAGGAGGTTGGGCTCTGCTGAAGTCCGTGAGACAAAT AAATCCCCTGGGGCCAGACCATTGCCTGGAAAGCTACCAAAAGGAGCCGTCCAGACACCG AGTAAGAAGGGAGCCCTGTCCTTATTTAATGCTGCTCAAGGCAAGAAGCGCCCAGCATCA GCCTATAGCAGTGAGGAGGAGGGAGAGGAGGAAGACTCTGAAGAGGGTGGTGTGGTGAAC GAGGGGGACCTCTGGGGCTCTGAGGACAGTGATGCCGATATGGTAGATGACTATGGAGCC AACTCCAGTTCAGAGGACGAAGAAGAGGATGACAGTGAAGAGTTGCTGCCCATTGAAAGG GCTGCTCGAAAGCAGAAGGCCCAGGAAGCTGTTACTGGGAGCCAGTGGAGTGAGGAGGAG ACTGAGGAAGAGGAGGAGGAATCCCCTGAGTCAGGCCCTAGAGAAGATGATGAGACAGAA GGGGGCCTCCAGATCAATGTGGATGAGGAGGAGCCTTTTGTACTGCCCCTTGCTGGAGAG ATGGAGCAGGATGCCCAGGCTCCAGACTTGCCGCGAGTTCACAAGCGCATCCAAGATATA GTGGGAGTGTTGCGTGATTTTGGGACTCAGCGGGAGGAGGGTCGGTCTCGTGCTGAATAT CTGCAGCGGCTTCGGAAGGATTTGGCCACTTATTACTCCTACGGAGACTTTCTCCTTGGC AAGCTCATGGACCTCTTCCCTCTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 98-208, gnl|bosTau2|chr5 (60610350-60610463) | |
| 98-208, gnl|Hg17|chr12 (6547353-6547243) | |
| 98-208, gnl|Mm7|chr6 (125157801-125157915) | |
| 342-585, gnl|bosTau2|chr5 (60612369-60612606) | |
| 342-585, gnl|canFam2|chr27 (41473639-41473418) | |
| 342-585, gnl|dasNov1|scaffold_4087 (129052-129274) | |
| 342-585, gnl|echTel1|scaffold_307219 (8602-8389) | |
| 342-585, gnl|hg17|chr12 (6545491-6545700) | |
| 342-585, gnl|Hg17|chr12 (6545753-6545525) | |
| 342-585, gnl|loxAfr1|scaffold_25340 (20620-20401) | |
| 342-585, gnl|mm7|chr6 (125160363-125160158) | |
| 342-585, gnl|monDom2|scaffold_31 (14968743-14968934) | |
| 342-585, gnl|oryCun1|scaffold_199228 (107549-107765) | |
| 342-585, gnl|panTro1|chr10 (7080956-7081165) | |
| 342-585, gnl|rheMac2|chr11 (6718068-6718275) | |
| 342-585, gnl|rn3|chr4 (161499382-161499183) | |
| 791-984, gnl|bosTau2|chr5 (60613978-60614171) | |
| 791-984, gnl|canFam2|chr27 (41475966-41475774) | |
| 791-984, gnl|danRer3|chrNA (75377735-75377548) | |
| 791-984, gnl|dasNov1|scaffold_4087 (126918-127110) | |
| 791-984, gnl|fr1|chrUn (74817335-74817143) | |
| 791-984, gnl|galGal2|chr1 (71051002-71051194) | |
| 791-984, gnl|hg17|chr12 (6542741-6542933) | |
| 791-984, gnl|Hg17|chr12 (6542941-6542748) | |
| 791-984, gnl|loxAfr1|scaffold_25340 (22458-22266) | |
| 791-984, gnl|mm7|chr6 (125163122-125162930) | |
| 791-984, gnl|Mm7|chr6 (125162920-125163113) | |
| 791-984, gnl|monDom2|scaffold_31 (14964725-14964917) | |
| 791-984, gnl|panTro1|chr10 (7078189-7078381) | |
| 791-984, gnl|rheMac2|chr11 (6714737-6714929) | |
| 791-984, gnl|rn3|chr4 (161502985-161502793) | |
| 791-984, gnl|tetNig1|chr8 (8885100-8884908) | |
| 791-984, gnl|xenTro1|scaffold_991 (22527-22338) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 98-208, gnl|bosTau2|chr5 (60610350-60610463) | |
| 98-208, gnl|Hg17|chr12 (6547353-6547243) | |
| 98-208, gnl|Mm7|chr6 (125157801-125157915) | |
| 342-585, gnl|bosTau2|chr5 (60612369-60612606) | |
| 342-585, gnl|canFam2|chr27 (41473639-41473418) | |
| 342-585, gnl|dasNov1|scaffold_4087 (129052-129274) | |
| 342-585, gnl|echTel1|scaffold_307219 (8602-8389) | |
| 342-585, gnl|hg17|chr12 (6545491-6545700) | |
| 342-585, gnl|Hg17|chr12 (6545753-6545525) | |
| 342-585, gnl|loxAfr1|scaffold_25340 (20620-20401) | |
| 342-585, gnl|mm7|chr6 (125160363-125160158) | |
| 342-585, gnl|monDom2|scaffold_31 (14968743-14968934) | |
| 342-585, gnl|oryCun1|scaffold_199228 (107549-107765) | |
| 342-585, gnl|panTro1|chr10 (7080956-7081165) | |
| 342-585, gnl|rheMac2|chr11 (6718068-6718275) | |
| 342-585, gnl|rn3|chr4 (161499382-161499183) | |
| 791-984, gnl|bosTau2|chr5 (60613978-60614171) | |
| 791-984, gnl|canFam2|chr27 (41475966-41475774) | |
| 791-984, gnl|danRer3|chrNA (75377735-75377548) | |
| 791-984, gnl|dasNov1|scaffold_4087 (126918-127110) | |
| 791-984, gnl|fr1|chrUn (74817335-74817143) | |
| 791-984, gnl|galGal2|chr1 (71051002-71051194) | |
| 791-984, gnl|hg17|chr12 (6542741-6542933) | |
| 791-984, gnl|Hg17|chr12 (6542941-6542748) | |
| 791-984, gnl|loxAfr1|scaffold_25340 (22458-22266) | |
| 791-984, gnl|mm7|chr6 (125163122-125162930) | |
| 791-984, gnl|Mm7|chr6 (125162920-125163113) | |
| 791-984, gnl|monDom2|scaffold_31 (14964725-14964917) | |
| 791-984, gnl|panTro1|chr10 (7078189-7078381) | |
| 791-984, gnl|rheMac2|chr11 (6714737-6714929) | |
| 791-984, gnl|rn3|chr4 (161502985-161502793) | |
| 791-984, gnl|tetNig1|chr8 (8885100-8884908) | |
| 791-984, gnl|xenTro1|scaffold_991 (22527-22338) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nje (0.16592) |