Ss1.1-Pla1-C0001063_D22.5
|
GTCTTTTGGAATGCTGCACAAAAATCTTTTGGGAACAAGACAGGCATAAATAAATAAAAT
CACCATGCTGTACAGTAGAAAAATATATATATAAATAAATGACAAAAAATAAAAAATAAA
ACAAAAAAAAATTAAAAAATGAATAAATACACAAGCTCTAGCAGATCATTCACAAATTCC
TCCAGATCCATTGATTATCACCATTCCTTGTGTTGGTTTTGCTTCTCCTGCCTGTCTGGT
GTAATGGTGCTTCCATGACTTTTGATGTTTGAAAGGCTCTTTAGCTCTGGCATGATCAAA
GTGTGTTTTACAGTTGTCTGAGATATTCCTTCTCTTTCTCTTTGTTCTGTAAGAGGGATT
GAGGAAGCCCATGTGTGCAAATACCCTTCCATACTTATCTTCTCCTCTTCTCTTAATCCC
TTTCCCCTCAACCCTAGGGTGCTAGCTGCCTGGAAGATGTTACCCTGGAGCTGAGCAGCT
CATGTCAGGAATTCTCCAGGCTTGGGCCTTTGGGCTGAGTTGACCCAGTGTGTAGGTGCT
GGGGATGGAGAGACCCATGGAATAGGTACTTACCTGAGTTATATTGAGAGACCTGAAGAC
ATAGCATCTTCACATAATCAACATGACCTTAACCTGTGATAGCACTGAGCTCCTTTTATT
TCTTTTTTCAGGTTGAGGAATGTGCTCAAATAATGCAAATATAATTGTTTTTAGTCCTGG
GGATTAAGAAACTTGGGGCATGTTCACATTACCTGATGATGTAAATACTGATGTTATGTT
TTAATTTTTTTTTTTTTGTACAGAAATGCTTATTTACCACTGAAATAATCTGAACAATAA
CTTTTAAAATGT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GTCTTTTGGAATGCTGCACAAAAATCTTTTGGGAACAAGACAGGCATAAATAAATAAAAT
CACCATGCTGTACAGTAGAAAAATATATATATAAATAAATGACAAAAAATAAAAAATAAA
ACAAAAAAAAATTAAAAAATGAATAAATACACAAGCTCTAGCAGATCATTCACAAATTCC
TCCAGATCCATTGATTATCACCATTCCTTGTGTTGGTTTTGCTTCTCCTGCCTGTCTGGT
GTAATGGTGCTTCCATGACTTTTGATGTTTGAAAGGCTCTTTAGCTCTGGCATGATCAAA
GTGTGTTTTACAGTTGTCTGAGATATTCCTTCTCTTTCTCTTTGTTCTGTAAGAGGGATT
GAGGAAGCCCATGTGTGCAAATACCCTTCCATACTTATCTTCTCCTCTTCTCTTAATCCC
TTTCCCCTCAACCCTAGGGTGCTAGCTGCCTGGAAGATGTTACCCTGGAGCTGAGCAGCT
CATGTCAGGAATTCTCCAGGCTTGGGCCTTTGGGCTGAGTTGACCCAGTGTGTAGGTGCT
GGGGATGGAGAGACCCATGGAATAGGTACTTACCTGAGTTATATTGAGAGACCTGAAGAC
ATAGCATCTTCACATAATCAACATGACCTTAACCTGTGATAGCACTGAGCTCCTTTTATT
TCTTTTTTCAGGTTGAGGAATGTGCTCAAATAATGCAAATATAATTGTTTTTAGTCCTGG
GGATTAAGAAACTTGGGGCATGTTCACATTACCTGATGATGTAAATACTGATGTTATGTT
TTAATTTTTTTTTTTTTGTACAGAAATGCTTATTTACCACTGAAATAATCTGAACAATAA
CTTTTAAAATGT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
435-560, + strand, RNAmicro p=0.999235 |
|
425-569, - strand, RNAmicro p=0.932075 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
435-560, + strand, RNAmicro p=0.999235 |
|
425-569, - strand, RNAmicro p=0.932075 |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map