Non-Coding RNA Search

Ss1.1-Pla1-C0001063_N03.5

Sequence:


               
               CACGCGGTGCGACTTCACACTCAGCAAAACCAACCTGGCCCGAATCAGAGAGATCATGGA
GAAGTTCGGCAAGCAGCCTGTCAGCCTGCCCGCCAGGCGGCAGAAGCTGCGGGGGCGGAA
GAGACGACAGCGTGGGTGACCTCGCAACTCTTGAGTCATGTTCCGGACCCCTGCAAATTA
AACCACTCTGGCTGTAGCTCCATAGAGGACTCGCTCCTTGTTGTTTTCTCTGTGATTCAA
GAAGACCTGGGAGAATCTGTGCATTGCAAGGCTAGTCCCAAGGGGAGGTCTAGGGTAGTT
TCTTGGGCGGAGCAGGAGAAGAAGGCTAGTGGGGCCGAGAGAGTGAGAAAATTCAGGACG
TCAACCTGGGAGTCTGGGAAAGAGAGGAGCTTGCCTGTTGAAGGTTTCCTGGCTGCACAG
GAAGGGAAACTGGTGCTTCTCCTGTTTGCGTGACAGCAAGAGTTCCCATGCATTTGCAAT
TTGCATGACTGAAAGGCAACATTCCCAGGGCTCTGCCATCCCAAATAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACGCGGTGCGACTTCACACTCAGCAAAACCAACCTGGCCCGAATCAGAGAGATCATGGA
GAAGTTCGGCAAGCAGCCTGTCAGCCTGCCCGCCAGGCGGCAGAAGCTGCGGGGGCGGAA
GAGACGACAGCGTGGGTGACCTCGCAACTCTTGAGTCATGTTCCGGACCCCTGCAAATTA
AACCACTCTGGCTGTAGCTCCATAGAGGACTCGCTCCTTGTTGTTTTCTCTGTGATTCAA
GAAGACCTGGGAGAATCTGTGCATTGCAAGGCTAGTCCCAAGGGGAGGTCTAGGGTAGTT
TCTTGGGCGGAGCAGGAGAAGAAGGCTAGTGGGGCCGAGAGAGTGAGAAAATTCAGGACG
TCAACCTGGGAGTCTGGGAAAGAGAGGAGCTTGCCTGTTGAAGGTTTCCTGGCTGCACAG
GAAGGGAAACTGGTGCTTCTCCTGTTTGCGTGACAGCAAGAGTTCCCATGCATTTGCAAT
TTGCATGACTGAAAGGCAACATTCCCAGGGCTCTGCCATCCCAAATAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-526, gnl|bosTau2|chr1 (83779659-83780209)
               

               
               1-526, gnl|Hg17|chr10 (125496408-125495839)
               

               
               1-526, gnl|Mm7|chr7 (128448925-128448365)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-526, gnl|bosTau2|chr1 (83779659-83780209)
               

               
               1-526, gnl|Hg17|chr10 (125496408-125495839)
               

               
               1-526, gnl|Mm7|chr7 (128448925-128448365)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cly (0.120642)
               

               
               jca (0.11396)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.120642)
               

               
               jca (0.11396)

	1-526, gnl\|bosTau2\|chr1 (83779659-83780209)
	1-526, gnl\|Hg17\|chr10 (125496408-125495839)
	1-526, gnl\|Mm7\|chr7 (128448925-128448365)