Non-Coding RNA Search

Ss1.1-SmaI-SSC5B04.5

Sequence:


               
               CGAGGTTTCCTCTACTAATATCAAACTCCCAGTCCTCTCCTCATCTGCCTTGACAACTGC
AAATCTGTTATCTATATATCTCTGGGTCTGTTTTTG------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------TATACTGAGAATGCCAGATCCTTAATCTGCTGTGCC
GCAAGGGAACTCCATTATTTCACTCTTTTTAAATGACTGAGTAGTATTCCATTGTAGACA
CACACACACACACACACACACGCACGCACGCACACACAATCTTCTTCATTCATTCTTCTG
TCGATGGGCATTATGTTGTTTCTGTATATTCGTATTGTCAATAGTGCTTCTGTAAACATA
AGCATGCATGTATCTTTTCTAATTACAGTTTTGTCTGGATATAAGCCCAGGAGTGGGAAT
GCTGGAACATATGGCAACTCTATTTTTAGTTTTTTTTATGAACCTCCATACTGTTTTCCC
TAGCGGCTGCACAAATTTACAATTTCCTCCAACACTTCAATAGGGCTCCCTTTTCTCCAT
GCCCTCTCCAATATTTATTAATTGTAGGCTTTTTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAGGTTTCCTCTACTAATATCAAACTCCCAGTCCTCTCCTCATCTGCCTTGACAACTGC
AAATCTGTTATCTATATATCTCTGGGTCTGTTTTTG------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------TATACTGAGAATGCCAGATCCTTAATCTGCTGTGCC
GCAAGGGAACTCCATTATTTCACTCTTTTTAAATGACTGAGTAGTATTCCATTGTAGACA
CACACACACACACACACACACGCACGCACGCACACACAATCTTCTTCATTCATTCTTCTG
TCGATGGGCATTATGTTGTTTCTGTATATTCGTATTGTCAATAGTGCTTCTGTAAACATA
AGCATGCATGTATCTTTTCTAATTACAGTTTTGTCTGGATATAAGCCCAGGAGTGGGAAT
GCTGGAACATATGGCAACTCTATTTTTAGTTTTTTTTATGAACCTCCATACTGTTTTCCC
TAGCGGCTGCACAAATTTACAATTTCCTCCAACACTTCAATAGGGCTCCCTTTTCTCCAT
GCCCTCTCCAATATTTATTAATTGTAGGCTTTTTAT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               140-527, gnl|bosTau2|chr1 (29901163-29901556)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               140-527, gnl|bosTau2|chr1 (29901163-29901556)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               cli (0.152812)
               

               
               liv (0.146284)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cli (0.152812)
               

               
               liv (0.146284)