Non-Coding RNA Search

Ss1.1-SmaI-SSZ84060.5

Sequence:


               
               TGTATTCTTTAAATTTTCAACATGATATTTATGAGCTTGATAAAATGGTTCTAAAGTTCA
TCTGAAATTTTCCACATACCACAAAACTATCAGAGTTGGCTGGGAATAGGCAGATAGACT
AATGGAACAGAAAAGAGAATCCAAAAACAGACCTTGGTTTATATGGAAATTTACTAGATA
ATAAAAGAGGTATTTCAAATCAATAGAGGAACAATGGACTCTTCTCAACCTTCGTTGTCC
AGCATCACAGCTACTAACCACAGCTTTGTTTATGAGATTAAATACAGTTCAGTTCCCTAG
GAGCACTGGGCACATTTTGAGTACTCAGAAGCCACAGGTGACTGGTTGCCGCTGCACTGG
AATGTGCAGATACACAGCATTTCATCACTGCAGAAAATTCCATTGGCTAGCACCACCCTA
GGTGGTTGAGGGGACACCTGGCTACATAACAACATACTTAGGAAAAAATGCCCTGACTCA
GCGCCTCTGGACTTAATTCCTCAGGTAACATTAATACACAGCCTGGGTTACAAACCTCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTATTCTTTAAATTTTCAACATGATATTTATGAGCTTGATAAAATGGTTCTAAAGTTCA
TCTGAAATTTTCCACATACCACAAAACTATCAGAGTTGGCTGGGAATAGGCAGATAGACT
AATGGAACAGAAAAGAGAATCCAAAAACAGACCTTGGTTTATATGGAAATTTACTAGATA
ATAAAAGAGGTATTTCAAATCAATAGAGGAACAATGGACTCTTCTCAACCTTCGTTGTCC
AGCATCACAGCTACTAACCACAGCTTTGTTTATGAGATTAAATACAGTTCAGTTCCCTAG
GAGCACTGGGCACATTTTGAGTACTCAGAAGCCACAGGTGACTGGTTGCCGCTGCACTGG
AATGTGCAGATACACAGCATTTCATCACTGCAGAAAATTCCATTGGCTAGCACCACCCTA
GGTGGTTGAGGGGACACCTGGCTACATAACAACATACTTAGGAAAAAATGCCCTGACTCA
GCGCCTCTGGACTTAATTCCTCAGGTAACATTAATACACAGCCTGGGTTACAAACCTCCC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               9-440, gnl|bosTau2|chr11 (15343402-15342978)
               

               
               9-440, gnl|Hg17|chr2 (42460796-42461214)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-440, gnl|bosTau2|chr11 (15343402-15342978)
               

               
               9-440, gnl|Hg17|chr2 (42460796-42461214)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	9-440, gnl\|bosTau2\|chr11 (15343402-15342978)
	9-440, gnl\|Hg17\|chr2 (42460796-42461214)