Ss1.1-Spl1-SPL010001G10.5
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TCCTGTTGACAGGCTCCGCTGAGGAGGACCCGCAAGCAGAGAAAATGCACCTGCTGATGC
TCCTCCCCCTCCTCTTCCAGCTGTCAGGCTCCTCTCCTGTCACAGGTCCGAAAGCACTGA
GGGGCCAGGAGCGGGGCTCCCTGGCTGTCACAGGTCGATACACTCCTGGGGGCCAGGAGC
ACGGGAAGTGGTCTGTGCAGTGTCGATACACTCCTGGGTGGGAGTCCCACGGGAAGTGGT
GGTGCCGAGGAGCGGAGGTGAAGAGGGACCGTGTGTTTGTTCAAACCACTGCATCAGAGC
CGGAGGTGAAGAGGGACCGTGTGTCCATCAGGGACGATCGGGAAAACCTTTATTGGTGTG
GCATTGAGAGAGAGCTCAGGCTGGACGATGCAGGCATTTATTGGTGTGTTGACCCAGCAC
CCACGACAGTGCCGACCACCACTTCCGCTATTAACACGTTCACAGCACCTGTCACCTCAG
GAGATGACTCCCTGAATATGACCAGCCACGGTCCCAACGGCAGCATCTTCGGGAATCTCA
GCACCCTTCTTCCCCTCATCTTTGCTGTGTTGCTGCTTCTCTTGGTGGTGGCCTCCGTCG
TGGTTTGGAGGATGGTGAAGCAACAGAAGAAAGGGGCTGCAACATCCCCAGAGCAGCCCT
TGGAGAGCGACCTCTGCTACGCAAACCTGAACCTGCAGGAGCCCAACTCTGGCTCTTCCC
AGAGGAAGGCCTCCACCCAGCCCTCCTCCTCTGCCCAGGGCCGCCCCAAGGATGTGGAGT
ATGTTACCATGGCTCCCTTCCCCAGGGAGGACATCGCCTATGCAGCTCTGTCTTTGGGGG
ACAATGAGAATCAAGAGGCGACCTACAGCAACATGGGGGACCTCCTGGCCCACGATCCCA
GTAGGAGCCACGAGGAGCCCACAGAATACAGTGCCGTCAAGAAGGCTTAGCCTGCGCTCC
AGGTGCCCCTCGGGCCCCCCTTGAGGCCTGCAATCACATTCCTGCTTTATCTGCTTTCTA
CCCCTCGTCCCCTCCCGGGACCAGCTGGCGATGGAGGCCCACGGGCAGCTTAGGCTCGGG
TTCGGGGCTCCTGGGGGTTAGATAGGGGTCTCTGCACATCCTTTTCTCTCCCACACAGCC
TGGGAGGGGGCTGGGGTACACCCTGGAGCTGCTGAGGGAGGAATCACGACGCTAATGATA
ATAGTAATTAACCTTTATTTATTGCTGACCATGCGTGATGGGTTGAATAACGGCCCTCAA
ATTAGTGGCATCTGAATCCCCAGAACCTGACAACGTTTCCTGATATGGTACAAGGTGCCT
TGCGGGTGTAATGGAGTCAAGGATCTGGAGATGGGGAGATTATTCTGGATTATCCAGCTG
GGCCCTAAACATAATCACGAGGGTCCTTATAAGAAGGAGGCAAGAAGGTCACGGAGAAGA
TGGCATGATGGTGGGAAGAGAGGTCCTGGTGACGTGGCCAGGATCCACAGAACCCTGTAG
CCTCCGGGAGCTGGAAAAGCCAAGGAATGGATCCTCCCCTGGAGCCTCCAGAAGGAACCA
GCCCTGCTGACTCTTTGACTTTAGCCCAGGGAAACTGATTGCATCCTTCTGGCCTCTGGA
ATTGTAGGAGAATAAATTTGCATCGTTTTGTAATTAAAAAAAAAAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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TCCTGTTGACAGGCTCCGCTGAGGAGGACCCGCAAGCAGAGAAAATGCACCTGCTGATGC
TCCTCCCCCTCCTCTTCCAGCTGTCAGGCTCCTCTCCTGTCACAGGTCCGAAAGCACTGA
GGGGCCAGGAGCGGGGCTCCCTGGCTGTCACAGGTCGATACACTCCTGGGGGCCAGGAGC
ACGGGAAGTGGTCTGTGCAGTGTCGATACACTCCTGGGTGGGAGTCCCACGGGAAGTGGT
GGTGCCGAGGAGCGGAGGTGAAGAGGGACCGTGTGTTTGTTCAAACCACTGCATCAGAGC
CGGAGGTGAAGAGGGACCGTGTGTCCATCAGGGACGATCGGGAAAACCTTTATTGGTGTG
GCATTGAGAGAGAGCTCAGGCTGGACGATGCAGGCATTTATTGGTGTGTTGACCCAGCAC
CCACGACAGTGCCGACCACCACTTCCGCTATTAACACGTTCACAGCACCTGTCACCTCAG
GAGATGACTCCCTGAATATGACCAGCCACGGTCCCAACGGCAGCATCTTCGGGAATCTCA
GCACCCTTCTTCCCCTCATCTTTGCTGTGTTGCTGCTTCTCTTGGTGGTGGCCTCCGTCG
TGGTTTGGAGGATGGTGAAGCAACAGAAGAAAGGGGCTGCAACATCCCCAGAGCAGCCCT
TGGAGAGCGACCTCTGCTACGCAAACCTGAACCTGCAGGAGCCCAACTCTGGCTCTTCCC
AGAGGAAGGCCTCCACCCAGCCCTCCTCCTCTGCCCAGGGCCGCCCCAAGGATGTGGAGT
ATGTTACCATGGCTCCCTTCCCCAGGGAGGACATCGCCTATGCAGCTCTGTCTTTGGGGG
ACAATGAGAATCAAGAGGCGACCTACAGCAACATGGGGGACCTCCTGGCCCACGATCCCA
GTAGGAGCCACGAGGAGCCCACAGAATACAGTGCCGTCAAGAAGGCTTAGCCTGCGCTCC
AGGTGCCCCTCGGGCCCCCCTTGAGGCCTGCAATCACATTCCTGCTTTATCTGCTTTCTA
CCCCTCGTCCCCTCCCGGGACCAGCTGGCGATGGAGGCCCACGGGCAGCTTAGGCTCGGG
TTCGGGGCTCCTGGGGGTTAGATAGGGGTCTCTGCACATCCTTTTCTCTCCCACACAGCC
TGGGAGGGGGCTGGGGTACACCCTGGAGCTGCTGAGGGAGGAATCACGACGCTAATGATA
ATAGTAATTAACCTTTATTTATTGCTGACCATGCGTGATGGGTTGAATAACGGCCCTCAA
ATTAGTGGCATCTGAATCCCCAGAACCTGACAACGTTTCCTGATATGGTACAAGGTGCCT
TGCGGGTGTAATGGAGTCAAGGATCTGGAGATGGGGAGATTATTCTGGATTATCCAGCTG
GGCCCTAAACATAATCACGAGGGTCCTTATAAGAAGGAGGCAAGAAGGTCACGGAGAAGA
TGGCATGATGGTGGGAAGAGAGGTCCTGGTGACGTGGCCAGGATCCACAGAACCCTGTAG
CCTCCGGGAGCTGGAAAAGCCAAGGAATGGATCCTCCCCTGGAGCCTCCAGAAGGAACCA
GCCCTGCTGACTCTTTGACTTTAGCCCAGGGAAACTGATTGCATCCTTCTGGCCTCTGGA
ATTGTAGGAGAATAAATTTGCATCGTTTTGTAATTAAAAAAAAAAAAA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1230-1638, gnl|bosTau2|chr19 (51968030-51968441) |
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1230-1638, gnl|canFam2|chr9 (8713870-8713564) |
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1230-1638, gnl|dasNov1|scaffold_51392 (12488-12173) |
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1230-1638, gnl|hg17|chr17 (70202056-70202402) |
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1230-1638, gnl|Hg17|chr17 (70202482-70202065) |
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1230-1638, gnl|loxAfr1|scaffold_23260 (8139-7813) |
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1230-1638, gnl|mm7|chr11 (115225264-115225648) |
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1230-1638, gnl|oryCun1|scaffold_168976 (10568-10290) |
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1230-1638, gnl|panTro1|chr19 (73547286-73547632) |
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1230-1638, gnl|rheMac2|chr16 (69965771-69966110) |
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1230-1638, gnl|rn3|chr10 (105206817-105207170) |
| |
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1275-1587, gnl|bosTau2|chr16 (46651946-46652257) |
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1275-1587, gnl|Hg17|chr1 (181025740-181026052) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1230-1638, gnl|bosTau2|chr19 (51968030-51968441) |
|
1230-1638, gnl|canFam2|chr9 (8713870-8713564) |
|
1230-1638, gnl|dasNov1|scaffold_51392 (12488-12173) |
|
1230-1638, gnl|hg17|chr17 (70202056-70202402) |
|
1230-1638, gnl|Hg17|chr17 (70202482-70202065) |
|
1230-1638, gnl|loxAfr1|scaffold_23260 (8139-7813) |
|
1230-1638, gnl|mm7|chr11 (115225264-115225648) |
|
1230-1638, gnl|oryCun1|scaffold_168976 (10568-10290) |
|
1230-1638, gnl|panTro1|chr19 (73547286-73547632) |
|
1230-1638, gnl|rheMac2|chr16 (69965771-69966110) |
|
1230-1638, gnl|rn3|chr10 (105206817-105207170) |
| |
|
1275-1587, gnl|bosTau2|chr16 (46651946-46652257) |
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1275-1587, gnl|Hg17|chr1 (181025740-181026052) |
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cje (0.330469) |
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sto (0.179824) |
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cst (0.140036) |
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med (0.116252) |
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cty (0.10408) |
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cje (0.330469) |
|
sto (0.179824) |
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cst (0.140036) |
|
med (0.116252) |
|
cty (0.10408) |
