Ss1.1-Spl1-SPL010002H02.5
|
TTCTCCTCTCTCTCCCTCCCTCTCTCTCACCCGGCCTCTCTTTCTGCCTGTGTCCCCTGC
TGCCAACACCCCTTCTGTTGTGTTCCTCCCACTGGTCTTGTCCCCTCTAGGAGAAGATGT
CGGCCCAGGCCAGCTGCCTCAGCTTCATCAAGTACCTCCTGTTCGTTTTCAACCTCTTCT
TCTTCGTCCTAGGCAGCCTTATTTTCTGCTTCGGCATCTGGATACTCATTGATAAGACCA
GCTTCGTGTCCTTTGTGGGCTTGTCCTTCGTGCCCTTGCAGATCTGGTCCAAGGCCCTGG
CCATCTCAGGAATCCTCACCATGGGCCTTGCCCTCCTGGGCTGTGTGGGGGCCCTGAAGG
AGTTCCGCTGCCTGCTGGGCCTGTATTTTGGGGCACTGCTGCTCCTGTTTGCCACGCAGA
TCACCCTGGGAATCCTCATCTCCACGCAGCGAGTCCAGCTGGTGCGGAAAGTGAAGGACA
TCGTGCTGAAGACCATCCAGAACTACCGCGTCCACCCAGAGGAGACAGCGGCCGAGGAGA
GTTGGGACTACGTGCAGTTTCAGCTGCGCTGCTGCGGCTGGAACTCTCCTCGGGATTGGT
TCCGTATCCCCACCCTGAGGAGCAACGAGTCGGACGTGCACCTCGTGCCCTGCTCCTGCT
ATAACTCATCCGCGACCAACGACTCTGCAATCTTCGATACGTTCTACTTGTCCCAGTTCA
GCCGGCCCAGACCACAGGCGCAGTCCGGACACAATGCAGACATTTGCGTGGTCCCTGCAA
ACAGCCACATCTACAGAGAGGGCTGCGAGGGGAGCCTCAACAACTGGTTGCACAACAACC
TCATCTCTATAGTGGGCATTTGTCTCGGCGTCGGTCTACTCGAGCTCAGCTTCATGACGC
TGTCCATGTTCCTGTGCAGAAACCTGGACCATGTCTACGACCGGCTTGCTCGGTACCGCT
AGGCCCCACCCTTCCCGAAGCCCCGCCCTGACCCCCTCAAGTGCCTGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTCTCCTCTCTCTCCCTCCCTCTCTCTCACCCGGCCTCTCTTTCTGCCTGTGTCCCCTGC
TGCCAACACCCCTTCTGTTGTGTTCCTCCCACTGGTCTTGTCCCCTCTAGGAGAAGATGT
CGGCCCAGGCCAGCTGCCTCAGCTTCATCAAGTACCTCCTGTTCGTTTTCAACCTCTTCT
TCTTCGTCCTAGGCAGCCTTATTTTCTGCTTCGGCATCTGGATACTCATTGATAAGACCA
GCTTCGTGTCCTTTGTGGGCTTGTCCTTCGTGCCCTTGCAGATCTGGTCCAAGGCCCTGG
CCATCTCAGGAATCCTCACCATGGGCCTTGCCCTCCTGGGCTGTGTGGGGGCCCTGAAGG
AGTTCCGCTGCCTGCTGGGCCTGTATTTTGGGGCACTGCTGCTCCTGTTTGCCACGCAGA
TCACCCTGGGAATCCTCATCTCCACGCAGCGAGTCCAGCTGGTGCGGAAAGTGAAGGACA
TCGTGCTGAAGACCATCCAGAACTACCGCGTCCACCCAGAGGAGACAGCGGCCGAGGAGA
GTTGGGACTACGTGCAGTTTCAGCTGCGCTGCTGCGGCTGGAACTCTCCTCGGGATTGGT
TCCGTATCCCCACCCTGAGGAGCAACGAGTCGGACGTGCACCTCGTGCCCTGCTCCTGCT
ATAACTCATCCGCGACCAACGACTCTGCAATCTTCGATACGTTCTACTTGTCCCAGTTCA
GCCGGCCCAGACCACAGGCGCAGTCCGGACACAATGCAGACATTTGCGTGGTCCCTGCAA
ACAGCCACATCTACAGAGAGGGCTGCGAGGGGAGCCTCAACAACTGGTTGCACAACAACC
TCATCTCTATAGTGGGCATTTGTCTCGGCGTCGGTCTACTCGAGCTCAGCTTCATGACGC
TGTCCATGTTCCTGTGCAGAAACCTGGACCATGTCTACGACCGGCTTGCTCGGTACCGCT
AGGCCCCACCCTTCCCGAAGCCCCGCCCTGACCCCCTCAAGTGCCTGG
|
|
gi|54696564|gb|AAV38654.1| |
Protein identifier
|
gi|54696564|gb|AAV38654.1| |
|
9-187, gnl|bosTau2|chr18 (48394297-48394472) |
|
9-187, gnl|Hg17|chr19 (54530505-54530680) |
|
9-187, gnl|Mm7|chr7 (41414553-41414386) |
| |
|
258-383, gnl|bosTau2|chr18 (48395676-48395801) |
|
258-383, gnl|Hg17|chr19 (54531977-54532102) |
|
258-383, gnl|Mm7|chr7 (41413013-41412888) |
| |
|
560-801, gnl|bosTau2|chr18 (48397329-48397567) |
|
560-801, gnl|Hg17|chr19 (54533763-54534006) |
|
560-801, gnl|Mm7|chr7 (41411375-41411134) |
| |
|
864-1003, gnl|bosTau2|chr18 (48398987-48399125) |
|
864-1003, gnl|canFam2|chr1 (110018613-110018186) |
|
864-1003, gnl|echTel1|scaffold_295188 (2755-3138) |
|
864-1003, gnl|hg17|chr19 (54535221-54535616) |
|
864-1003, gnl|Hg17|chr19 (54535300-54535438) |
|
864-1003, gnl|mm7|chr7 (41409772-41409410) |
|
864-1003, gnl|Mm7|chr7 (41409724-41409598) |
|
864-1003, gnl|monDom2|scaffold_105 (4346308-4346659) |
|
864-1003, gnl|oryCun1|scaffold_168603 (4166-3835) |
|
864-1003, gnl|panTro1|chr20 (51896916-51897309) |
|
864-1003, gnl|rheMac2|chr19 (55587602-55587973) |
|
864-1003, gnl|rn3|chr1 (95788478-95788113) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
9-187, gnl|bosTau2|chr18 (48394297-48394472) |
|
9-187, gnl|Hg17|chr19 (54530505-54530680) |
|
9-187, gnl|Mm7|chr7 (41414553-41414386) |
| |
|
258-383, gnl|bosTau2|chr18 (48395676-48395801) |
|
258-383, gnl|Hg17|chr19 (54531977-54532102) |
|
258-383, gnl|Mm7|chr7 (41413013-41412888) |
| |
|
560-801, gnl|bosTau2|chr18 (48397329-48397567) |
|
560-801, gnl|Hg17|chr19 (54533763-54534006) |
|
560-801, gnl|Mm7|chr7 (41411375-41411134) |
| |
|
864-1003, gnl|bosTau2|chr18 (48398987-48399125) |
|
864-1003, gnl|canFam2|chr1 (110018613-110018186) |
|
864-1003, gnl|echTel1|scaffold_295188 (2755-3138) |
|
864-1003, gnl|hg17|chr19 (54535221-54535616) |
|
864-1003, gnl|Hg17|chr19 (54535300-54535438) |
|
864-1003, gnl|mm7|chr7 (41409772-41409410) |
|
864-1003, gnl|Mm7|chr7 (41409724-41409598) |
|
864-1003, gnl|monDom2|scaffold_105 (4346308-4346659) |
|
864-1003, gnl|oryCun1|scaffold_168603 (4166-3835) |
|
864-1003, gnl|panTro1|chr20 (51896916-51897309) |
|
864-1003, gnl|rheMac2|chr19 (55587602-55587973) |
|
864-1003, gnl|rn3|chr1 (95788478-95788113) |
|
lnt (0.284616) |
|
nlu (0.191681) |
|
eli (0.151814) |
|
cag (0.151194) |
|
pla (0.133672) |
|
eep (0.122564) |
|
med (0.116252) |
|
lnt (0.284616) |
|
nlu (0.191681) |
|
eli (0.151814) |
|
cag (0.151194) |
|
pla (0.133672) |
|
eep (0.122564) |
|
med (0.116252) |
