Ss1.1-Spl1-SPL010003D12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCTTCCTCGCTCGGGTGCGTCAGCGGCAGCGCCTGCCGAGCCTCAGCAGCGCCAGGACT TGCAGATACCGGAAATCTGTGTGGCTCCAAGTTCCCTGCTAGCGAGAGAATGTGTACGCA GCAGGCATGACAGGCTGAGGCGTTCGGTTTTCCTGCCGACCTTGGTGCAGATCACGTCTC TGCTGGTTGGAACCAGAGGGCACAATGAGCACGAGAAAGCGTCGTGGCGGGGCAGTAAAT TCTAGACAAGCCCAGAAGCGAACTCGAGAATCACCCTCCACCCCTGAGATGGCCTTGGAG GCAGAACCTATAGAACTTGTGGAGAGTGCTGGAGACGAAATAGTGGACCTCACCTGTGAA TCTTTAGAGCCCGTGGTGGTGGACCTGACGCACAATGACTCTGTTGTGATTGTTGAAGAA AGGAGGCGGCCAAGGAGGAATGCGAGGAGGCTGCGCCAGGACCACGCCGACAGCTGTGTG GTGAGCAGTGATGACGAGGAGCTGTCCAGGGACAGAGACGTCTATGTGACCACCCAGACC CCCCGAAATGCCAGGGAAGAGGCAGCTACAGGACTCAGGCCCTCTGGCACCGTCAGTTGT CCGATCTGCATGGACGGGTACTCAGAGATTGTGCAGAACGGACGTCTCATCGTTTCCACA GAATGCGGCCATGTCTTCTGTAGCCAGTGCCTCCGCGATTCCCTTAAGAACGCTAACACT TGCCCAACTTGCAGGAAAAAGATCAACCACAAACGATACCACCCCATTTATATATGAAGT GTCGCGAGCTGCTCAGGAGAGTCGGATGGACAGACAGAGCCTGGCTGGGTTCGCCACGTG GCCTTATGTGGGTTCTCTGCCTCCAGTTTCTTGAGCGCAAAAAGACTGATTTCAAAATCA GCGTCTGATATG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCTTCCTCGCTCGGGTGCGTCAGCGGCAGCGCCTGCCGAGCCTCAGCAGCGCCAGGACT TGCAGATACCGGAAATCTGTGTGGCTCCAAGTTCCCTGCTAGCGAGAGAATGTGTACGCA GCAGGCATGACAGGCTGAGGCGTTCGGTTTTCCTGCCGACCTTGGTGCAGATCACGTCTC TGCTGGTTGGAACCAGAGGGCACAATGAGCACGAGAAAGCGTCGTGGCGGGGCAGTAAAT TCTAGACAAGCCCAGAAGCGAACTCGAGAATCACCCTCCACCCCTGAGATGGCCTTGGAG GCAGAACCTATAGAACTTGTGGAGAGTGCTGGAGACGAAATAGTGGACCTCACCTGTGAA TCTTTAGAGCCCGTGGTGGTGGACCTGACGCACAATGACTCTGTTGTGATTGTTGAAGAA AGGAGGCGGCCAAGGAGGAATGCGAGGAGGCTGCGCCAGGACCACGCCGACAGCTGTGTG GTGAGCAGTGATGACGAGGAGCTGTCCAGGGACAGAGACGTCTATGTGACCACCCAGACC CCCCGAAATGCCAGGGAAGAGGCAGCTACAGGACTCAGGCCCTCTGGCACCGTCAGTTGT CCGATCTGCATGGACGGGTACTCAGAGATTGTGCAGAACGGACGTCTCATCGTTTCCACA GAATGCGGCCATGTCTTCTGTAGCCAGTGCCTCCGCGATTCCCTTAAGAACGCTAACACT TGCCCAACTTGCAGGAAAAAGATCAACCACAAACGATACCACCCCATTTATATATGAAGT GTCGCGAGCTGCTCAGGAGAGTCGGATGGACAGACAGAGCCTGGCTGGGTTCGCCACGTG GCCTTATGTGGGTTCTCTGCCTCCAGTTTCTTGAGCGCAAAAAGACTGATTTCAAAATCA GCGTCTGATATG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 213-326, gnl|bosTau2|chr6 (64985581-64985694) | |
| 213-326, gnl|Hg17|chr4 (2465964-2466077) | |
| 213-326, gnl|Mm7|chr5 (33409342-33409455) | |
| 417-543, gnl|bosTau2|chr6 (64998261-64998387) | |
| 417-543, gnl|canFam2|chr3 (64545028-64544871) | |
| 417-543, gnl|dasNov1|scaffold_72736 (8109-7983) | |
| 417-543, gnl|echTel1|scaffold_279290 (9301-9458) | |
| 417-543, gnl|hg17|chr1 (227464307-227464464) | |
| 417-543, gnl|Hg17|chr4 (2481394-2481520) | |
| 417-543, gnl|loxAfr1|scaffold_46846 (4437-4282) | |
| 417-543, gnl|mm7|chr10 (6354581-6354436) | |
| 417-543, gnl|Mm7|chr5 (33412466-33412592) | |
| 417-543, gnl|monDom2|scaffold_10 (42069210-42069061) | |
| 417-543, gnl|oryCun1|scaffold_58638 (1016-1173) | |
| 417-543, gnl|panTro1|chr1 (211315763-211315920) | |
| 417-543, gnl|rheMac2|chr1 (1471658-1471501) | |
| 417-543, gnl|rn3|chr14 (82095869-82095714) | |
| 626-912, gnl|bosTau2|chr6 (64999583-64999867) | |
| 626-912, gnl|canFam2|chr3 (64543733-64543543) | |
| 626-912, gnl|danRer3|chr14 (15595020-15595177) | |
| 626-912, gnl|dasNov1|scaffold_72736 (7935-7756) | |
| 626-912, gnl|echTel1|scaffold_279290 (10349-10524) | |
| 626-912, gnl|fr1|chrUn (302482483-302482311) | |
| 626-912, gnl|galGal2|chr4 (82880188-82880002) | |
| 626-912, gnl|hg17|chr4 (2482613-2482803) | |
| 626-912, gnl|Hg17|chr4 (2482626-2482895) | |
| 626-912, gnl|loxAfr1|scaffold_46846 (3216-3038) | |
| 626-912, gnl|mm7|chr5 (33413772-33413962) | |
| 626-912, gnl|Mm7|chr5 (33413785-33414054) | |
| 626-912, gnl|monDom2|scaffold_10 (42061195-42061018) | |
| 626-912, gnl|oryCun1|scaffold_203954 (3920-4110) | |
| 626-912, gnl|panTro1|chr3 (2594097-2594287) | |
| 626-912, gnl|rheMac2|chr1 (1470437-1470247) | |
| 626-912, gnl|rn3|chr14 (82094689-82094499) | |
| 626-912, gnl|tetNig1|chrUn_random (47576366-47576210) | |
| 626-912, gnl|xenTro1|scaffold_1192 (126449-126638) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 213-326, gnl|bosTau2|chr6 (64985581-64985694) | |
| 213-326, gnl|Hg17|chr4 (2465964-2466077) | |
| 213-326, gnl|Mm7|chr5 (33409342-33409455) | |
| 417-543, gnl|bosTau2|chr6 (64998261-64998387) | |
| 417-543, gnl|canFam2|chr3 (64545028-64544871) | |
| 417-543, gnl|dasNov1|scaffold_72736 (8109-7983) | |
| 417-543, gnl|echTel1|scaffold_279290 (9301-9458) | |
| 417-543, gnl|hg17|chr1 (227464307-227464464) | |
| 417-543, gnl|Hg17|chr4 (2481394-2481520) | |
| 417-543, gnl|loxAfr1|scaffold_46846 (4437-4282) | |
| 417-543, gnl|mm7|chr10 (6354581-6354436) | |
| 417-543, gnl|Mm7|chr5 (33412466-33412592) | |
| 417-543, gnl|monDom2|scaffold_10 (42069210-42069061) | |
| 417-543, gnl|oryCun1|scaffold_58638 (1016-1173) | |
| 417-543, gnl|panTro1|chr1 (211315763-211315920) | |
| 417-543, gnl|rheMac2|chr1 (1471658-1471501) | |
| 417-543, gnl|rn3|chr14 (82095869-82095714) | |
| 626-912, gnl|bosTau2|chr6 (64999583-64999867) | |
| 626-912, gnl|canFam2|chr3 (64543733-64543543) | |
| 626-912, gnl|danRer3|chr14 (15595020-15595177) | |
| 626-912, gnl|dasNov1|scaffold_72736 (7935-7756) | |
| 626-912, gnl|echTel1|scaffold_279290 (10349-10524) | |
| 626-912, gnl|fr1|chrUn (302482483-302482311) | |
| 626-912, gnl|galGal2|chr4 (82880188-82880002) | |
| 626-912, gnl|hg17|chr4 (2482613-2482803) | |
| 626-912, gnl|Hg17|chr4 (2482626-2482895) | |
| 626-912, gnl|loxAfr1|scaffold_46846 (3216-3038) | |
| 626-912, gnl|mm7|chr5 (33413772-33413962) | |
| 626-912, gnl|Mm7|chr5 (33413785-33414054) | |
| 626-912, gnl|monDom2|scaffold_10 (42061195-42061018) | |
| 626-912, gnl|oryCun1|scaffold_203954 (3920-4110) | |
| 626-912, gnl|panTro1|chr3 (2594097-2594287) | |
| 626-912, gnl|rheMac2|chr1 (1470437-1470247) | |
| 626-912, gnl|rn3|chr14 (82094689-82094499) | |
| 626-912, gnl|tetNig1|chrUn_random (47576366-47576210) | |
| 626-912, gnl|xenTro1|scaffold_1192 (126449-126638) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| med (0.116252) |