Non-Coding RNA Search

Ss1.1-Spl1-SPL010005E01.5.5

Sequence:


               
               GGGTTTTGTTTGACTCTTTTTCCTTCTCTCTCAGTTTTTTGGTTGAATAAACTAGATGAC
ATTGACTCGACCTAAGCTGGTTGTGCTCCAGAAGGCTGATTTTTCCATTTTGTTTTCCGA
TGATATTTATTAAATAGCTTCTAAGGGTACCATGGCACCTGTCCTTTGACGCCATCCCCC
CTTCCCGCAGCCTCTGCTACGAGGGTAGCAGCGTCGTGTGTGCTCCCCGCGTGCATGTCA
GCGGCCCAGGCCCCACAGCCCCGGGCCTGGGAGCAGCCTGGCTGAATGTTAGCACCTGTT
GTGTTCCGTGCTAGTGATCGCTGCCTTTCCCGCCGTCTGTTGGCGTAATAATAGAAAAAG
AAGTCATAAAGTGAAAATAGTTCACAAACAACCACGTCGCATCGTTATCAAGAGCGGCGG
CCAAGCTCTTCTAGAATCTGGGAGCTCCAGCTAATTGATGCACGAGGAGTGGAAAGAAAA
CTAACGAAGCCCAAGCGGGTTCTGTGACCCACTAGGACGTAGTGCAAACCCCGAGTAGTC
GACGGGGCTTTGTTTGGGAAACTGGGCATCTTTGGAGCGCGATGCAGCCCGGAGGAAGGG
ATGCCGGGATGCTGGGATCCGGGGGCAGCTGTAACCGCTGTGGTCCCCCCCCCCCGCCCC
CGTGAGCCCCGTGCCCTCCTCCTGGGGTTCCCTCGAGGAGAAACAGGAGGATTTCTCGGG
GAGATCCTGCGGCTGAGGGCTTCCTCCTGGTTCTGTGTGAGATGGAAGGGGGCTGGGCTG
CCTCTTTTGCTGATCTTCTGTCGAATGGAATACCACCACAGCGAAGGCTTTCTTGGAATG
TTTGCGCAACATGAAATAATCGTTTTGTAACTTATGCTGTATAGTTTCCTTTGACTCTGT
TGACAGAATGTGTAACGCTGGCACACATTTGAAAAAAAAAAAAAAATCTCTGTTAATCGC
CTCTTCTTAGCACCTATTTCAAACCTAAAGCTCAATGTTGAAATAAAGAAGTAGAGAATT
ACTGAGATGCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGTTTTGTTTGACTCTTTTTCCTTCTCTCTCAGTTTTTTGGTTGAATAAACTAGATGAC
ATTGACTCGACCTAAGCTGGTTGTGCTCCAGAAGGCTGATTTTTCCATTTTGTTTTCCGA
TGATATTTATTAAATAGCTTCTAAGGGTACCATGGCACCTGTCCTTTGACGCCATCCCCC
CTTCCCGCAGCCTCTGCTACGAGGGTAGCAGCGTCGTGTGTGCTCCCCGCGTGCATGTCA
GCGGCCCAGGCCCCACAGCCCCGGGCCTGGGAGCAGCCTGGCTGAATGTTAGCACCTGTT
GTGTTCCGTGCTAGTGATCGCTGCCTTTCCCGCCGTCTGTTGGCGTAATAATAGAAAAAG
AAGTCATAAAGTGAAAATAGTTCACAAACAACCACGTCGCATCGTTATCAAGAGCGGCGG
CCAAGCTCTTCTAGAATCTGGGAGCTCCAGCTAATTGATGCACGAGGAGTGGAAAGAAAA
CTAACGAAGCCCAAGCGGGTTCTGTGACCCACTAGGACGTAGTGCAAACCCCGAGTAGTC
GACGGGGCTTTGTTTGGGAAACTGGGCATCTTTGGAGCGCGATGCAGCCCGGAGGAAGGG
ATGCCGGGATGCTGGGATCCGGGGGCAGCTGTAACCGCTGTGGTCCCCCCCCCCCGCCCC
CGTGAGCCCCGTGCCCTCCTCCTGGGGTTCCCTCGAGGAGAAACAGGAGGATTTCTCGGG
GAGATCCTGCGGCTGAGGGCTTCCTCCTGGTTCTGTGTGAGATGGAAGGGGGCTGGGCTG
CCTCTTTTGCTGATCTTCTGTCGAATGGAATACCACCACAGCGAAGGCTTTCTTGGAATG
TTTGCGCAACATGAAATAATCGTTTTGTAACTTATGCTGTATAGTTTCCTTTGACTCTGT
TGACAGAATGTGTAACGCTGGCACACATTTGAAAAAAAAAAAAAAATCTCTGTTAATCGC
CTCTTCTTAGCACCTATTTCAAACCTAAAGCTCAATGTTGAAATAAAGAAGTAGAGAATT
ACTGAGATGCAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               4-1031, gnl|bosTau2|chr13 (6825702-6826742)
               

               
               4-1031, gnl|Hg17|chr10 (8156800-8157805)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-1031, gnl|bosTau2|chr13 (6825702-6826742)
               

               
               4-1031, gnl|Hg17|chr10 (8156800-8157805)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               che (0.136314)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)
               

               
               ebs (0.118301)

	4-1031, gnl\|bosTau2\|chr13 (6825702-6826742)
	4-1031, gnl\|Hg17\|chr10 (8156800-8157805)