Non-Coding RNA Search

Ss1.1-Spl1-SPL010005G08.5

Sequence:


               
               AATGATGTATCTCTAAGCGACCAAAGCCTGAATCAAACTTCGGTGATTAGTCTCAACTGA
CTGACTATAAAGTCTACGGAGCTTGCGCCAGTCTCTTTGCGGCGCCCCCGATTTAGACGC
AGGTTTTGGAAGAGGGCGGGGGAGAAGGTGTCGTTGCTGGAGCTGAGAGCAGACGGCCAG
AGTCCTCAGGGATGAACCTCGAGTTGCTGGGTGAGGAGGACTGTGGCTGCGTCTTAGAGA
ACCCTTGGTCCTGGAAAGGAGGGAACCGGGCGGAGGGGACTCAGGCTGCAACACTAAGGA
CACAGTTCTGCGATGGATCTTTGGGCGCTTCGATATGGAGCAGCAGCAGGGGGAGGAAGC
CTAGCTTCGACCCGAACAGAATGCATTGCTTTTCCTGAGGCCACCTTGCAGTTCAGTTGT
GGAGCGATAGGGACAGATAGTTTGTGACTTAGTTTCGATTACAAGGATCCAAAGCAAGCA
GGACCAGAGTCCTGGAGAAGGAATCTGAGGAAGTGAGGCTTGAGGTAAAGCTTTGAACAC
TTGTCAGGGTTTTGAGTGCCTGGGTAGGTTCATTCTTTTTGTAGAAACACGGGATGCCTA
AAGGAAGGAACTTGTATACAAGTCCTTCGTTGAATAAGTGGAAAAGGGCTTAGAGGGTAC
TGAAGGCATAAAGCAAGTAAATGGTATAGTTGGCACTGGAATCCAGTTGCCTTGTCTTTT
TATTCAAGGTCTTTAACTCTCAGGGACATGTAAAACACTGAGGGGTGAACTCCAGGGCAG
TTGTGTTTTGTCACTCTCTTTGATGCATTTACTCCTTACCCTTTGACCAAGTTGTTTGTA
AACTCTAGATCCTTCTGGGTTTTCATTAGGTAATCTTTAGCATTGTAACCTAGGGATGTC
TGAGGTTTTCAAGAACTTCTAAGTGACTTGCTATTTTCAATGGCTATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATGATGTATCTCTAAGCGACCAAAGCCTGAATCAAACTTCGGTGATTAGTCTCAACTGA
CTGACTATAAAGTCTACGGAGCTTGCGCCAGTCTCTTTGCGGCGCCCCCGATTTAGACGC
AGGTTTTGGAAGAGGGCGGGGGAGAAGGTGTCGTTGCTGGAGCTGAGAGCAGACGGCCAG
AGTCCTCAGGGATGAACCTCGAGTTGCTGGGTGAGGAGGACTGTGGCTGCGTCTTAGAGA
ACCCTTGGTCCTGGAAAGGAGGGAACCGGGCGGAGGGGACTCAGGCTGCAACACTAAGGA
CACAGTTCTGCGATGGATCTTTGGGCGCTTCGATATGGAGCAGCAGCAGGGGGAGGAAGC
CTAGCTTCGACCCGAACAGAATGCATTGCTTTTCCTGAGGCCACCTTGCAGTTCAGTTGT
GGAGCGATAGGGACAGATAGTTTGTGACTTAGTTTCGATTACAAGGATCCAAAGCAAGCA
GGACCAGAGTCCTGGAGAAGGAATCTGAGGAAGTGAGGCTTGAGGTAAAGCTTTGAACAC
TTGTCAGGGTTTTGAGTGCCTGGGTAGGTTCATTCTTTTTGTAGAAACACGGGATGCCTA
AAGGAAGGAACTTGTATACAAGTCCTTCGTTGAATAAGTGGAAAAGGGCTTAGAGGGTAC
TGAAGGCATAAAGCAAGTAAATGGTATAGTTGGCACTGGAATCCAGTTGCCTTGTCTTTT
TATTCAAGGTCTTTAACTCTCAGGGACATGTAAAACACTGAGGGGTGAACTCCAGGGCAG
TTGTGTTTTGTCACTCTCTTTGATGCATTTACTCCTTACCCTTTGACCAAGTTGTTTGTA
AACTCTAGATCCTTCTGGGTTTTCATTAGGTAATCTTTAGCATTGTAACCTAGGGATGTC
TGAGGTTTTCAAGAACTTCTAAGTGACTTGCTATTTTCAATGGCTATG

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               71-552, gnl|bosTau2|chr16 (3580019-3579533)
               

               
               71-552, gnl|Hg17|chr1 (201822779-201822251)
               

               
               71-552, gnl|Mm7|chr1 (132378308-132378807)
               


               
               611-809, gnl|bosTau2|chr16 (3579494-3579292)
               

               
               611-809, gnl|Hg17|chr1 (201822213-201821958)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               71-552, gnl|bosTau2|chr16 (3580019-3579533)
               

               
               71-552, gnl|Hg17|chr1 (201822779-201822251)
               

               
               71-552, gnl|Mm7|chr1 (132378308-132378807)
               


               
               611-809, gnl|bosTau2|chr16 (3579494-3579292)
               

               
               611-809, gnl|Hg17|chr1 (201822213-201821958)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               mas (0.210305)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)

	71-552, gnl\|bosTau2\|chr16 (3580019-3579533)
	71-552, gnl\|Hg17\|chr1 (201822779-201822251)
	71-552, gnl\|Mm7\|chr1 (132378308-132378807)

	611-809, gnl\|bosTau2\|chr16 (3579494-3579292)
	611-809, gnl\|Hg17\|chr1 (201822213-201821958)