Non-Coding RNA Search

Ss1.1-Spl1-SPL010018E11.5

Sequence:


               
               CCAAAAAAGGGGTTGAAACTTCCTTTTCTAGCCAGAGCCCCGGGGCGCCTTCTCCTTGGG
CAGGCGCTCCTGGAAGCGCCCTACAGAGGCGGTGGAGACCTTGGCCACCTGCATGGCGCG
GCCCAGCTCTTCCTTACTCTGATGTCCGGTGGGGTGCATGCCGGCCGCGCTGGGCAGCTG
CATCTTGTGCGCGCGGGCCAGGTTACGCAGCCGGTTCAGCTCGTTCTTGGCTACCCGTTC
CTTCTTGGCCTGAATACGCTTGGCGAACTGGTCCTCCATGGGGTCGGCATTGCTCGGCAC
CTCAATCAACCATTCCTTGGTATCATCGCGGGCCCGTTGGTAGCCCCAGCGGCGGCGCCA
CTGGCCGCTTACCTCGTCCCACACCAGGTTGGTCTTCTTCTTAGGACGGATGCCCTTGAG
ACGCGCAAACTGCTGCCAGCGTGTAAGAGGGCGCGGCCGGGGCACCGGCTTCTCGCGCGG
CAGTCGAGTGGTGGGCTCCGGCAGCCGCGCCACCAGCGTCTCCTCCACGCGCTCGGTGGG
CAGCTGCCAGAGCTGGTTGATGAGCAGCTGCGTGTTGTCCCGCGCCAGGGCTCGCAGCTC
GGCCTCCTTCGTGGGTCCCGCATGCCGCAGCCCGGTCGGGGGGTTCCGGTCGGAGGCCAG
CAGGTTACCCAGGTCGAACTCCAGCTCTAGTTCCTTGTGCACGGTGATGCGCTGCAGCTT
TTCCGCCTCGTCCCGCTCCGCCTTTGCCAACAGCTCCTCCACGCTCTGGCCCTCCATGGC
TCCGGCTGTTCCGGGGTAACAGTTCCAATCAATTCTCCAGTAGCGCCGGCAAAGGCCAAG
GCAACACAGCCACGTGCAGTCGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCAAAAAAGGGGTTGAAACTTCCTTTTCTAGCCAGAGCCCCGGGGCGCCTTCTCCTTGGG
CAGGCGCTCCTGGAAGCGCCCTACAGAGGCGGTGGAGACCTTGGCCACCTGCATGGCGCG
GCCCAGCTCTTCCTTACTCTGATGTCCGGTGGGGTGCATGCCGGCCGCGCTGGGCAGCTG
CATCTTGTGCGCGCGGGCCAGGTTACGCAGCCGGTTCAGCTCGTTCTTGGCTACCCGTTC
CTTCTTGGCCTGAATACGCTTGGCGAACTGGTCCTCCATGGGGTCGGCATTGCTCGGCAC
CTCAATCAACCATTCCTTGGTATCATCGCGGGCCCGTTGGTAGCCCCAGCGGCGGCGCCA
CTGGCCGCTTACCTCGTCCCACACCAGGTTGGTCTTCTTCTTAGGACGGATGCCCTTGAG
ACGCGCAAACTGCTGCCAGCGTGTAAGAGGGCGCGGCCGGGGCACCGGCTTCTCGCGCGG
CAGTCGAGTGGTGGGCTCCGGCAGCCGCGCCACCAGCGTCTCCTCCACGCGCTCGGTGGG
CAGCTGCCAGAGCTGGTTGATGAGCAGCTGCGTGTTGTCCCGCGCCAGGGCTCGCAGCTC
GGCCTCCTTCGTGGGTCCCGCATGCCGCAGCCCGGTCGGGGGGTTCCGGTCGGAGGCCAG
CAGGTTACCCAGGTCGAACTCCAGCTCTAGTTCCTTGTGCACGGTGATGCGCTGCAGCTT
TTCCGCCTCGTCCCGCTCCGCCTTTGCCAACAGCTCCTCCACGCTCTGGCCCTCCATGGC
TCCGGCTGTTCCGGGGTAACAGTTCCAATCAATTCTCCAGTAGCGCCGGCAAAGGCCAAG
GCAACACAGCCACGTGCAGTCGCC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|12859373|dbj|BAB31631.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|12859373|dbj|BAB31631.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-857, gnl|bosTau2|chr14 (19248519-19249379)
               

               
               5-857, gnl|Hg17|chr8 (67504693-67503831)
               

               
               5-857, gnl|Mm7|chr1 (9689000-9688139)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-857, gnl|bosTau2|chr14 (19248519-19249379)
               

               
               5-857, gnl|Hg17|chr8 (67504693-67503831)
               

               
               5-857, gnl|Mm7|chr1 (9689000-9688139)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ssp (0.13552)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ssp (0.13552)

	5-857, gnl\|bosTau2\|chr14 (19248519-19249379)
	5-857, gnl\|Hg17\|chr8 (67504693-67503831)
	5-857, gnl\|Mm7\|chr1 (9689000-9688139)