Non-Coding RNA Search

Ss1.1-Spl1-SPL010020A09.5

Sequence:


               
               CTGTCCATCACGACTGCGGACCCATGGACAAGAGCGCAGGCACCGGCCCCAAAAGCGAGG
AGAAGCGGGAGAAGATGAAGCGGACCCTGTAAGTACGGCTTTCTTCTCTCCCCTGCCAGC
CCCGCGGACCTAGCTGTCCCGGGCGGCTGCAAACGCGGTACATCCGCGCTTGGCTTCCAC
CCTGGAGCGGTGCCTCCATCTCTGCAGGGGAAAACATTGTGTAAAAGGTACACTTGCTAG
GTAGGGTTAAATCTATGTGGTGGGTCCTTTGTGATGTAACCGAAGGACTCGAGGGTAGAG
TCGAGGAACTGCGGCAAATTCGTGATGCAGAGGCGGTGGTAGATGAGCTGAGGAATCGCA
GGTTGGGTTTTTATCTCCCCGCATCGAAAATGACACCAGAGAATCCTGCAGCCCAGGCGC
GTCCCCAGCATTCGTACGTTGCATTGTAAATTCTCATCAACTTACACAGCTGCTGGGATG
GAAATATTTTTGCTAGCTCTGAATATATTATTTTAAAATCTTTTTTTTTCCAGTTGAACA
ACAGATCTCACCCCCACCCAGCACTAAGGAACAAATAATTGTTCTGCATCATCTGGTTAA
AATGGGTGTTGTAGTTGCGATCACACACGCGCGCACACACGCACACGCACCTCACCTCAT
TGTTCACAGCTTCTAGAGTGGTCCAGATCCTCCTGCTCTAAGGGTGGAAGGGAAATACCC
ATGGCTGGCTCCGGGCAGTTCCACTGTCCGTTTCATCAAGTGTGAAATGTCTCAGAATTG
TAATTAACGTTGCAGAACTGCTGCTGCCTTTTGTGGGCCAGAAATAGCATCTGCCTTTTG
AACTATGCCAGCTAAATTCATTAAATACCCTATAATTGTAGGTTATCCTACGCGTAGTTA
TAAAACTAGCAGTTATGCTCAGATGAGTAGATGAAACTGTTCCAGGCATAGGTGCTGGGT
TTATATTTTAAAGGGGTAAGACTGACTTGAAGGAGGACTGTTTTGTCTTACTTCGTTGTC
TGTAGCTACTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGTCCATCACGACTGCGGACCCATGGACAAGAGCGCAGGCACCGGCCCCAAAAGCGAGG
AGAAGCGGGAGAAGATGAAGCGGACCCTGTAAGTACGGCTTTCTTCTCTCCCCTGCCAGC
CCCGCGGACCTAGCTGTCCCGGGCGGCTGCAAACGCGGTACATCCGCGCTTGGCTTCCAC
CCTGGAGCGGTGCCTCCATCTCTGCAGGGGAAAACATTGTGTAAAAGGTACACTTGCTAG
GTAGGGTTAAATCTATGTGGTGGGTCCTTTGTGATGTAACCGAAGGACTCGAGGGTAGAG
TCGAGGAACTGCGGCAAATTCGTGATGCAGAGGCGGTGGTAGATGAGCTGAGGAATCGCA
GGTTGGGTTTTTATCTCCCCGCATCGAAAATGACACCAGAGAATCCTGCAGCCCAGGCGC
GTCCCCAGCATTCGTACGTTGCATTGTAAATTCTCATCAACTTACACAGCTGCTGGGATG
GAAATATTTTTGCTAGCTCTGAATATATTATTTTAAAATCTTTTTTTTTCCAGTTGAACA
ACAGATCTCACCCCCACCCAGCACTAAGGAACAAATAATTGTTCTGCATCATCTGGTTAA
AATGGGTGTTGTAGTTGCGATCACACACGCGCGCACACACGCACACGCACCTCACCTCAT
TGTTCACAGCTTCTAGAGTGGTCCAGATCCTCCTGCTCTAAGGGTGGAAGGGAAATACCC
ATGGCTGGCTCCGGGCAGTTCCACTGTCCGTTTCATCAAGTGTGAAATGTCTCAGAATTG
TAATTAACGTTGCAGAACTGCTGCTGCCTTTTGTGGGCCAGAAATAGCATCTGCCTTTTG
AACTATGCCAGCTAAATTCATTAAATACCCTATAATTGTAGGTTATCCTACGCGTAGTTA
TAAAACTAGCAGTTATGCTCAGATGAGTAGATGAAACTGTTCCAGGCATAGGTGCTGGGT
TTATATTTTAAAGGGGTAAGACTGACTTGAAGGAGGACTGTTTTGTCTTACTTCGTTGTC
TGTAGCTACTGG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-1032, gnl|bosTau2|chr16 (5007031-5006013)
               

               
               1-1032, gnl|Hg17|chr1 (189509881-189510863)
               

               
               1-1032, gnl|Mm7|chr1 (143930377-143929407)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-1032, gnl|bosTau2|chr16 (5007031-5006013)
               

               
               1-1032, gnl|Hg17|chr1 (189509881-189510863)
               

               
               1-1032, gnl|Mm7|chr1 (143930377-143929407)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               pla (0.267344)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.267344)

	1-1032, gnl\|bosTau2\|chr16 (5007031-5006013)
	1-1032, gnl\|Hg17\|chr1 (189509881-189510863)
	1-1032, gnl\|Mm7\|chr1 (143930377-143929407)