Ss1.1-Spl1-SPL010020B07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGACCTTGGCGCGGCAATGGCGGCGCCCATGCTACGCTGGTGCTGTCCTGGAAGGCGTTG GGCTTTCCCTCGGATTGGCGACTGTTCTCGCCACGAGAAACGGTTTCCAGCTGGGTCCAC GGCCAGCGGGAAAAGGGGACAGAGCTCAGTGGCTCAGCAGCCCCTCATCACGGCCCAGAA GCCAAGGAAAGGTGAACGTAAATGGGCTGCTGTGGTAGGTTTGGAAATCCATGCCCAGAT TTCTTCCAACTCCAAACTCTTCTCTGGATCTCAAGTCCACTTTGCAGCACCTCCCAATTC TTTGGTATCTTTTTTTGATGCATCTCTGCCTGGAACTTTGCCGGTCCTCAACAGACGATG TGTGGAAGCGGCCGTGATGACTGGCCTGGCCCTGGGCTGCCGTATAAATAGGAAGTCCTT GTTCGACAGGAAGCATTACTTCTACGCAGATCTCCCGGCCGGCTACCAGATCACCCAGCA AAGGCTGCCGATCGCCGTGAACGGGAGCCTGGCGTACAGCATCTGTGTGGGGAAGAAGCC GGCGCAGGTGGTCCCCAGGACAGTGAGGGTCAAGCAGATCCAGCTGGAGCAGGACAGCGG CAAAAGCCTCCACGATGACCTGCGGTCCCAGACGCTCATTGACTTGAACAGGGCAGGGGT TGGCCTGCTGGAGGTGGTCCTGGAGCCCGACATGTCCTGTGGAGAAGAGGCGGCCACCGC CGTCAGGGAGCTGCAGCTGATTCTTCAGGCCCTGGGGACCAGCCAGGCCAACATGGCAGA GGGCCAGTTGAGAGTGGATGCCAATATATCTGTGCATCACCCTGGGGAGCCTTTGGGCAT TCGAACTGAAGTGAAGAATCTCAACAGTGCCAGGTTTTTGGCCAAAGCTATAGACTATGA AATTCAGAGGCAAATCAGTGAACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGACCTTGGCGCGGCAATGGCGGCGCCCATGCTACGCTGGTGCTGTCCTGGAAGGCGTTG GGCTTTCCCTCGGATTGGCGACTGTTCTCGCCACGAGAAACGGTTTCCAGCTGGGTCCAC GGCCAGCGGGAAAAGGGGACAGAGCTCAGTGGCTCAGCAGCCCCTCATCACGGCCCAGAA GCCAAGGAAAGGTGAACGTAAATGGGCTGCTGTGGTAGGTTTGGAAATCCATGCCCAGAT TTCTTCCAACTCCAAACTCTTCTCTGGATCTCAAGTCCACTTTGCAGCACCTCCCAATTC TTTGGTATCTTTTTTTGATGCATCTCTGCCTGGAACTTTGCCGGTCCTCAACAGACGATG TGTGGAAGCGGCCGTGATGACTGGCCTGGCCCTGGGCTGCCGTATAAATAGGAAGTCCTT GTTCGACAGGAAGCATTACTTCTACGCAGATCTCCCGGCCGGCTACCAGATCACCCAGCA AAGGCTGCCGATCGCCGTGAACGGGAGCCTGGCGTACAGCATCTGTGTGGGGAAGAAGCC GGCGCAGGTGGTCCCCAGGACAGTGAGGGTCAAGCAGATCCAGCTGGAGCAGGACAGCGG CAAAAGCCTCCACGATGACCTGCGGTCCCAGACGCTCATTGACTTGAACAGGGCAGGGGT TGGCCTGCTGGAGGTGGTCCTGGAGCCCGACATGTCCTGTGGAGAAGAGGCGGCCACCGC CGTCAGGGAGCTGCAGCTGATTCTTCAGGCCCTGGGGACCAGCCAGGCCAACATGGCAGA GGGCCAGTTGAGAGTGGATGCCAATATATCTGTGCATCACCCTGGGGAGCCTTTGGGCAT TCGAACTGAAGTGAAGAATCTCAACAGTGCCAGGTTTTTGGCCAAAGCTATAGACTATGA AATTCAGAGGCAAATCAGTGAACT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 49 entry(ies) | More info |
| Aligned organism(s): 49 entry(ies) | Help | Less info |
| 192-345, gnl|bosTau2|chr29 (6027041-6027194) | |
| 192-345, gnl|canFam2|chr15 (52711578-52711762) | |
| 192-345, gnl|danRer3|chr19 (65786805-65786617) | |
| 192-345, gnl|echTel1|scaffold_313007 (170123-169939) | |
| 192-345, gnl|fr1|chrUn (45380886-45380710) | |
| 192-345, gnl|galGal2|chr4 (33954031-33954228) | |
| 192-345, gnl|hg17|chr4 (153037525-153037712) | |
| 192-345, gnl|Hg17|chr4 (153037680-153037527) | |
| 192-345, gnl|loxAfr1|scaffold_9182 (9437-9253) | |
| 192-345, gnl|mm7|chr3 (85688871-85688688) | |
| 192-345, gnl|Mm7|chr3 (85688714-85688867) | |
| 192-345, gnl|monDom2|scaffold_9 (21363272-21363460) | |
| 192-345, gnl|oryCun1|scaffold_206808 (69882-70069) | |
| 192-345, gnl|panTro1|chr3 (170348224-170348411) | |
| 192-345, gnl|rheMac2|chr5 (143979206-143979394) | |
| 192-345, gnl|rn3|chr2 (177360061-177359876) | |
| 192-345, gnl|tetNig1|chr18 (7429183-7429381) | |
| 192-345, gnl|xenTro1|scaffold_93 (2168182-2168002) | |
| 452-657, gnl|bosTau2|chr12 (39564832-39565037) | |
| 452-657, gnl|canFam2|chr15 (52670711-52670895) | |
| 452-657, gnl|danRer3|chr19 (65800973-65800794) | |
| 452-657, gnl|dasNov1|scaffold_3766 (71088-71273) | |
| 452-657, gnl|echTel1|scaffold_313007 (205786-205616) | |
| 452-657, gnl|fr1|chrUn (45384498-45384327) | |
| 452-657, gnl|galGal2|chr4 (33937154-33937339) | |
| 452-657, gnl|hg17|chr4 (152995616-152995801) | |
| 452-657, gnl|Hg17|chr4 (152995837-152995632) | |
| 452-657, gnl|mm7|chr3 (85717445-85717264) | |
| 452-657, gnl|Mm7|chr3 (85717226-85717431) | |
| 452-657, gnl|monDom2|scaffold_9 (21337732-21337919) | |
| 452-657, gnl|panTro1|chr3 (170306162-170306347) | |
| 452-657, gnl|rheMac2|chr5 (143941342-143941527) | |
| 452-657, gnl|tetNig1|chr18 (7426032-7426202) | |
| 452-657, gnl|xenTro1|scaffold_93 (2178644-2178450) | |
| 777-893, gnl|bosTau2|chr12 (39578840-39578956) | |
| 777-893, gnl|canFam2|chr15 (52661456-52661614) | |
| 777-893, gnl|danRer3|chr19 (65805791-65805655) | |
| 777-893, gnl|dasNov1|scaffold_3766 (56292-56456) | |
| 777-893, gnl|fr1|chrUn (45384905-45384764) | |
| 777-893, gnl|galGal2|chr4 (33932732-33932883) | |
| 777-893, gnl|hg17|chr4 (152986731-152986888) | |
| 777-893, gnl|Hg17|chr4 (152986861-152986745) | |
| 777-893, gnl|mm7|chr3 (85724332-85724176) | |
| 777-893, gnl|Mm7|chr3 (85724200-85724316) | |
| 777-893, gnl|monDom2|scaffold_9 (21326706-21326860) | |
| 777-893, gnl|panTro1|chr3 (170297276-170297433) | |
| 777-893, gnl|rheMac2|chr5 (143932507-143932664) | |
| 777-893, gnl|tetNig1|chr18 (7425622-7425757) | |
| 777-893, gnl|xenTro1|scaffold_93 (2191264-2191134) |
| Aligned organism(s): 49 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 192-345, gnl|bosTau2|chr29 (6027041-6027194) | |
| 192-345, gnl|canFam2|chr15 (52711578-52711762) | |
| 192-345, gnl|danRer3|chr19 (65786805-65786617) | |
| 192-345, gnl|echTel1|scaffold_313007 (170123-169939) | |
| 192-345, gnl|fr1|chrUn (45380886-45380710) | |
| 192-345, gnl|galGal2|chr4 (33954031-33954228) | |
| 192-345, gnl|hg17|chr4 (153037525-153037712) | |
| 192-345, gnl|Hg17|chr4 (153037680-153037527) | |
| 192-345, gnl|loxAfr1|scaffold_9182 (9437-9253) | |
| 192-345, gnl|mm7|chr3 (85688871-85688688) | |
| 192-345, gnl|Mm7|chr3 (85688714-85688867) | |
| 192-345, gnl|monDom2|scaffold_9 (21363272-21363460) | |
| 192-345, gnl|oryCun1|scaffold_206808 (69882-70069) | |
| 192-345, gnl|panTro1|chr3 (170348224-170348411) | |
| 192-345, gnl|rheMac2|chr5 (143979206-143979394) | |
| 192-345, gnl|rn3|chr2 (177360061-177359876) | |
| 192-345, gnl|tetNig1|chr18 (7429183-7429381) | |
| 192-345, gnl|xenTro1|scaffold_93 (2168182-2168002) | |
| 452-657, gnl|bosTau2|chr12 (39564832-39565037) | |
| 452-657, gnl|canFam2|chr15 (52670711-52670895) | |
| 452-657, gnl|danRer3|chr19 (65800973-65800794) | |
| 452-657, gnl|dasNov1|scaffold_3766 (71088-71273) | |
| 452-657, gnl|echTel1|scaffold_313007 (205786-205616) | |
| 452-657, gnl|fr1|chrUn (45384498-45384327) | |
| 452-657, gnl|galGal2|chr4 (33937154-33937339) | |
| 452-657, gnl|hg17|chr4 (152995616-152995801) | |
| 452-657, gnl|Hg17|chr4 (152995837-152995632) | |
| 452-657, gnl|mm7|chr3 (85717445-85717264) | |
| 452-657, gnl|Mm7|chr3 (85717226-85717431) | |
| 452-657, gnl|monDom2|scaffold_9 (21337732-21337919) | |
| 452-657, gnl|panTro1|chr3 (170306162-170306347) | |
| 452-657, gnl|rheMac2|chr5 (143941342-143941527) | |
| 452-657, gnl|tetNig1|chr18 (7426032-7426202) | |
| 452-657, gnl|xenTro1|scaffold_93 (2178644-2178450) | |
| 777-893, gnl|bosTau2|chr12 (39578840-39578956) | |
| 777-893, gnl|canFam2|chr15 (52661456-52661614) | |
| 777-893, gnl|danRer3|chr19 (65805791-65805655) | |
| 777-893, gnl|dasNov1|scaffold_3766 (56292-56456) | |
| 777-893, gnl|fr1|chrUn (45384905-45384764) | |
| 777-893, gnl|galGal2|chr4 (33932732-33932883) | |
| 777-893, gnl|hg17|chr4 (152986731-152986888) | |
| 777-893, gnl|Hg17|chr4 (152986861-152986745) | |
| 777-893, gnl|mm7|chr3 (85724332-85724176) | |
| 777-893, gnl|Mm7|chr3 (85724200-85724316) | |
| 777-893, gnl|monDom2|scaffold_9 (21326706-21326860) | |
| 777-893, gnl|panTro1|chr3 (170297276-170297433) | |
| 777-893, gnl|rheMac2|chr5 (143932507-143932664) | |
| 777-893, gnl|tetNig1|chr18 (7425622-7425757) | |
| 777-893, gnl|xenTro1|scaffold_93 (2191264-2191134) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| med (0.116252) |