Non-Coding RNA Search

Ss1.1-Spl1-SPL010024H04.5

Sequence:


               
               TCCAAGTATCATACTTTGTGTAGTTAAAGAAGTGCAAGCTCACTTGTTAACTTAGACATC
AAGATATGTTTATATACTCTCATGACTTTGTAGGGTGGCATTTATTTATACATATACAAT
GTATGTTTATTCAGTGCCTGCTATGTACTTGGCAGTGAGCTAGGCCCTGGAAGTACACTG
GGAAGGGTGCTGCTTTTGGTTTTAATGTAATTGCTACCAGAGCGGGAGAACAACTGGCTC
CTTTCCTGCCTCAACTAGTTCCTCGTCTTTATCGTTATCAGTTTGATCCCAACCTTGGTA
TTCGACAGGCCATGACAAGTATTTGGAATGCACTGGTCACTGACAAATCATACTCTTATT
TCTGTGAACCCTGTTTGTCTGAGATGACACACGTGATGTAAGCCCATCCTCATCTTCCTT
TCTACTCTGTGTGCTGTTTAGCTCTGAATGATTTATTGAGAGGAAGACCCCTAGATGACA
CTCATGGCAACATTTTTTGAAAGCTCAAAAATGAAACAATCTAAATATCCATTGTGTGGA
TGGTTAAGGAAATGGCAGTGTATCCACACAAATGGATATCCACACAAATAGTCCGTAGTT
ACTGCCGATACATGGAGAACAGCCATGGGTCCTGCCTTCAAGGAGCTCACTTAGTTGAGG
GGTTAGATAAGGAAGCAGGCAATTATCCTATATGGTTTTCTCCCATCTGGCTGCCTCTCA
TATTCTCTTCCACTTTTAGATATTACGATTTCTTAGGGCTTGCCTCTGAGTATCTTTTAC
CCTCTTCACATTCCCTTTTTAGGTGAACTCATCTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCAAGTATCATACTTTGTGTAGTTAAAGAAGTGCAAGCTCACTTGTTAACTTAGACATC
AAGATATGTTTATATACTCTCATGACTTTGTAGGGTGGCATTTATTTATACATATACAAT
GTATGTTTATTCAGTGCCTGCTATGTACTTGGCAGTGAGCTAGGCCCTGGAAGTACACTG
GGAAGGGTGCTGCTTTTGGTTTTAATGTAATTGCTACCAGAGCGGGAGAACAACTGGCTC
CTTTCCTGCCTCAACTAGTTCCTCGTCTTTATCGTTATCAGTTTGATCCCAACCTTGGTA
TTCGACAGGCCATGACAAGTATTTGGAATGCACTGGTCACTGACAAATCATACTCTTATT
TCTGTGAACCCTGTTTGTCTGAGATGACACACGTGATGTAAGCCCATCCTCATCTTCCTT
TCTACTCTGTGTGCTGTTTAGCTCTGAATGATTTATTGAGAGGAAGACCCCTAGATGACA
CTCATGGCAACATTTTTTGAAAGCTCAAAAATGAAACAATCTAAATATCCATTGTGTGGA
TGGTTAAGGAAATGGCAGTGTATCCACACAAATGGATATCCACACAAATAGTCCGTAGTT
ACTGCCGATACATGGAGAACAGCCATGGGTCCTGCCTTCAAGGAGCTCACTTAGTTGAGG
GGTTAGATAAGGAAGCAGGCAATTATCCTATATGGTTTTCTCCCATCTGGCTGCCTCTCA
TATTCTCTTCCACTTTTAGATATTACGATTTCTTAGGGCTTGCCTCTGAGTATCTTTTAC
CCTCTTCACATTCCCTTTTTAGGTGAACTCATCTGT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               184-439, gnl|bosTau2|chr8 (55468887-55468634)
               

               
               184-439, gnl|Hg17|chr9 (111231560-111231283)
               

               
               184-439, gnl|Mm7|chr4 (58865724-58865456)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               184-439, gnl|bosTau2|chr8 (55468887-55468634)
               

               
               184-439, gnl|Hg17|chr9 (111231560-111231283)
               

               
               184-439, gnl|Mm7|chr4 (58865724-58865456)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nep (0.183925)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)

	184-439, gnl\|bosTau2\|chr8 (55468887-55468634)
	184-439, gnl\|Hg17\|chr9 (111231560-111231283)
	184-439, gnl\|Mm7\|chr4 (58865724-58865456)