Non-Coding RNA Search

Ss1.1-Spl1-SPL010035E01.5

Sequence:


               
               AAGGGTCAGTGTATGAACTCTGTTCTCACCCTCCTGTGGGTGTGCAAGCGGTACCCCCCA
AAATGCTATGGGATAGACGAGGCTGCTGGCAAGTGGGTTCCCCATGGTGGCAATTTCTTG
AGCTCCCAGGATAAGAGCTCTGAGGCTCTCAAATTCCTCCCAACTCCCAGTCTCTCCCAG
TCCCCTGACTCAGGTGCCTGGTATCCAGACTTGGCCCCGAGGGCAGTCCACACCAGTCTC
AGAAGGATCTTTATAACTCATGATTGGGACTCCTCCTCTTCCCTGCTCACACACCCTCCA
TGGCTCCCAAGTGCCTGGTGGTTGAGACCTGTATGATCCAGGCCTACCCTTCTCAGTGCC
CTCTCCCATCCCTCTGCCTTTCTGGTCTGGCCCTCCTTCCCAGCAATACCGCCTCCCTCT
GGAAGCTTTCATTTTCTTACGCCATTTACCTATGTCCCTCTTTTGGCCCAGAATGCCATC
CTCTTCCATGTTTTCTCACTCTTATTAAACACCTGAGTACACATGCAGAACTCTGGCCTG
GGCATTGAGAAGCACAGGTCCAGTTCTTGGCTCTGCCATTAACTCTCTGGGCCTCAGTTT
CCTCATCTGTAAAACAGTGTGATTAGAATTGGTCTCTAAGAGAAATGCACATCAAAACCA
CAATGAGGTACCATCTCAAACGGGTCAGAAGGGCCATCATTAATAAGCCCACCAATAACA
AATGCTGGAGAGGGTGTGGAGAAAAGGGAACCCCCCTGCACTGTTGGTGGGAATGTAAAT
TGGTGCAACCACTATGGAAAACTGTATGGAGATTCCTCAGAAAACTAAATATAGAACGAC
CATAAGATCTAGCAATCCCGCTCCTGGGCATATAGCTGGACAAAATTATAATTCAAAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGGGTCAGTGTATGAACTCTGTTCTCACCCTCCTGTGGGTGTGCAAGCGGTACCCCCCA
AAATGCTATGGGATAGACGAGGCTGCTGGCAAGTGGGTTCCCCATGGTGGCAATTTCTTG
AGCTCCCAGGATAAGAGCTCTGAGGCTCTCAAATTCCTCCCAACTCCCAGTCTCTCCCAG
TCCCCTGACTCAGGTGCCTGGTATCCAGACTTGGCCCCGAGGGCAGTCCACACCAGTCTC
AGAAGGATCTTTATAACTCATGATTGGGACTCCTCCTCTTCCCTGCTCACACACCCTCCA
TGGCTCCCAAGTGCCTGGTGGTTGAGACCTGTATGATCCAGGCCTACCCTTCTCAGTGCC
CTCTCCCATCCCTCTGCCTTTCTGGTCTGGCCCTCCTTCCCAGCAATACCGCCTCCCTCT
GGAAGCTTTCATTTTCTTACGCCATTTACCTATGTCCCTCTTTTGGCCCAGAATGCCATC
CTCTTCCATGTTTTCTCACTCTTATTAAACACCTGAGTACACATGCAGAACTCTGGCCTG
GGCATTGAGAAGCACAGGTCCAGTTCTTGGCTCTGCCATTAACTCTCTGGGCCTCAGTTT
CCTCATCTGTAAAACAGTGTGATTAGAATTGGTCTCTAAGAGAAATGCACATCAAAACCA
CAATGAGGTACCATCTCAAACGGGTCAGAAGGGCCATCATTAATAAGCCCACCAATAACA
AATGCTGGAGAGGGTGTGGAGAAAAGGGAACCCCCCTGCACTGTTGGTGGGAATGTAAAT
TGGTGCAACCACTATGGAAAACTGTATGGAGATTCCTCAGAAAACTAAATATAGAACGAC
CATAAGATCTAGCAATCCCGCTCCTGGGCATATAGCTGGACAAAATTATAATTCAAAAAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|284079|pir||E41925

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|284079|pir||E41925

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               636-900, gnl|bosTau2|chr10 (54470033-54469776)
               


               
               639-896, gnl|bosTau2|chr10 (45769390-45769647)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               636-900, gnl|bosTau2|chr10 (54470033-54469776)
               


               
               639-896, gnl|bosTau2|chr10 (45769390-45769647)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spl (0.143184)
               

               
               cbl (0.114797)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               cbl (0.114797)

	636-900, gnl\|bosTau2\|chr10 (54470033-54469776)

	639-896, gnl\|bosTau2\|chr10 (45769390-45769647)