Ss1.1-Spl1-SPL010036B11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AACCGCTAGGAGTGTGGCTGAGGCGGTGGCCGGCACGGGTCGGAACGAGGTGGAGTAGAG TGGTTCGGGCCTGGCTCCCGCGCTGGGGTGGAGCACCATGGACGAAGCGGGCAGCTGTGC GAGCGGCGGGGGCTTCCGCCCGGGCGTGGACAGCCTGGACGAGCCGCCCAACAGCCGCAT CTTCCTGGTGATCAGCAAGTACACGCCGGAGTCTGTGCTGAGGGAGCGCTTCTCGCCCTT CGGGGAGATCCAGGACATCTGGGTGGTGCGGGACAAACACACCAAGGAGTCCAAGGGCAT CGCCTTCGTCAAGTTTGCCCGCAGCTCGCAGGCGTGCAGGGCCATGGAGGAGATGCACGG CCAGTGCCTCAGCCCCAACGACACCAAGCCCATCAAGGTTTTCATTGCTCAGTCCAGATC ATCTGGAAGTCACCGAGATGTTGAAGATGAAGAACTTACAAGAATATTTGTTATGATACC AAAGTCCTACACAGAAGAAGATCTACGGGAAAAATTTAAGGTGTATGGAGATATCGAGTA CTGCAGCATTATTAAGAATAAAGTAACTGGAGAAAGTAAAGGCTTGGGCTACGTTCGATA CTTAAAACCATCACAAGCTGCCCAAGCAATAGAAAACTGTGATCGAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AACCGCTAGGAGTGTGGCTGAGGCGGTGGCCGGCACGGGTCGGAACGAGGTGGAGTAGAG TGGTTCGGGCCTGGCTCCCGCGCTGGGGTGGAGCACCATGGACGAAGCGGGCAGCTGTGC GAGCGGCGGGGGCTTCCGCCCGGGCGTGGACAGCCTGGACGAGCCGCCCAACAGCCGCAT CTTCCTGGTGATCAGCAAGTACACGCCGGAGTCTGTGCTGAGGGAGCGCTTCTCGCCCTT CGGGGAGATCCAGGACATCTGGGTGGTGCGGGACAAACACACCAAGGAGTCCAAGGGCAT CGCCTTCGTCAAGTTTGCCCGCAGCTCGCAGGCGTGCAGGGCCATGGAGGAGATGCACGG CCAGTGCCTCAGCCCCAACGACACCAAGCCCATCAAGGTTTTCATTGCTCAGTCCAGATC ATCTGGAAGTCACCGAGATGTTGAAGATGAAGAACTTACAAGAATATTTGTTATGATACC AAAGTCCTACACAGAAGAAGATCTACGGGAAAAATTTAAGGTGTATGGAGATATCGAGTA CTGCAGCATTATTAAGAATAAAGTAACTGGAGAAAGTAAAGGCTTGGGCTACGTTCGATA CTTAAAACCATCACAAGCTGCCCAAGCAATAGAAAACTGTGATCGAAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 1-399, gnl|bosTau2|chr1 (90277410-90277012) | |
| 1-399, gnl|Hg17|chr2 (178802698-178803082) | |
| 1-399, gnl|Mm7|chr2 (76213738-76214146) | |
| 519-648, gnl|bosTau2|chr1 (90271321-90271192) | |
| 519-648, gnl|canFam2|chr13 (31465329-31465416) | |
| 519-648, gnl|canFam2|chr36 (24783325-24783452) | |
| 519-648, gnl|danRer3|chr9 (163256-163393) | |
| 519-648, gnl|dasNov1|scaffold_95933 (3189-3279) | |
| 519-648, gnl|dasNov1|scaffold_95933 (3134-3262) | |
| 519-648, gnl|echTel1|scaffold_256847 (634-733) | |
| 519-648, gnl|echTel1|scaffold_256847 (589-715) | |
| 519-648, gnl|fr1|chrUn (229232056-229231944) | |
| 519-648, gnl|galGal2|chr7 (16340615-16340488) | |
| 519-648, gnl|hg17|chr2 (178808269-178808397) | |
| 519-648, gnl|Hg17|chr2 (178808287-178808416) | |
| 519-648, gnl|hg17|chr8 (132794083-132794181) | |
| 519-648, gnl|loxAfr1|scaffold_8678 (103430-103408) | |
| 519-648, gnl|mm7|chr15 (65629965-65630083) | |
| 519-648, gnl|mm7|chr2 (76217256-76217384) | |
| 519-648, gnl|Mm7|chr2 (76217274-76217403) | |
| 519-648, gnl|monDom2|scaffold_2 (78825394-78825522) | |
| 519-648, gnl|oryCun1|scaffold_192624 (1128-1031) | |
| 519-648, gnl|oryCun1|scaffold_205602 (109423-109543) | |
| 519-648, gnl|panTro1|chr13 (68591238-68591366) | |
| 519-648, gnl|panTro1|chr7 (135525849-135525947) | |
| 519-648, gnl|rheMac2|chr12 (41754919-41755047) | |
| 519-648, gnl|rheMac2|chr8 (134303351-134303449) | |
| 519-648, gnl|rn3|chr3 (58959466-58959594) | |
| 519-648, gnl|rn3|chr7 (102956216-102956311) | |
| 519-648, gnl|tetNig1|chr17 (9208131-9208019) | |
| 519-648, gnl|xenTro1|scaffold_546 (68792-68902) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-399, gnl|bosTau2|chr1 (90277410-90277012) | |
| 1-399, gnl|Hg17|chr2 (178802698-178803082) | |
| 1-399, gnl|Mm7|chr2 (76213738-76214146) | |
| 519-648, gnl|bosTau2|chr1 (90271321-90271192) | |
| 519-648, gnl|canFam2|chr13 (31465329-31465416) | |
| 519-648, gnl|canFam2|chr36 (24783325-24783452) | |
| 519-648, gnl|danRer3|chr9 (163256-163393) | |
| 519-648, gnl|dasNov1|scaffold_95933 (3189-3279) | |
| 519-648, gnl|dasNov1|scaffold_95933 (3134-3262) | |
| 519-648, gnl|echTel1|scaffold_256847 (634-733) | |
| 519-648, gnl|echTel1|scaffold_256847 (589-715) | |
| 519-648, gnl|fr1|chrUn (229232056-229231944) | |
| 519-648, gnl|galGal2|chr7 (16340615-16340488) | |
| 519-648, gnl|hg17|chr2 (178808269-178808397) | |
| 519-648, gnl|Hg17|chr2 (178808287-178808416) | |
| 519-648, gnl|hg17|chr8 (132794083-132794181) | |
| 519-648, gnl|loxAfr1|scaffold_8678 (103430-103408) | |
| 519-648, gnl|mm7|chr15 (65629965-65630083) | |
| 519-648, gnl|mm7|chr2 (76217256-76217384) | |
| 519-648, gnl|Mm7|chr2 (76217274-76217403) | |
| 519-648, gnl|monDom2|scaffold_2 (78825394-78825522) | |
| 519-648, gnl|oryCun1|scaffold_192624 (1128-1031) | |
| 519-648, gnl|oryCun1|scaffold_205602 (109423-109543) | |
| 519-648, gnl|panTro1|chr13 (68591238-68591366) | |
| 519-648, gnl|panTro1|chr7 (135525849-135525947) | |
| 519-648, gnl|rheMac2|chr12 (41754919-41755047) | |
| 519-648, gnl|rheMac2|chr8 (134303351-134303449) | |
| 519-648, gnl|rn3|chr3 (58959466-58959594) | |
| 519-648, gnl|rn3|chr7 (102956216-102956311) | |
| 519-648, gnl|tetNig1|chr17 (9208131-9208019) | |
| 519-648, gnl|xenTro1|scaffold_546 (68792-68902) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eje (0.0988338) | |
| ldo (0.0970026) |