Non-Coding RNA Search

Ss1.1-Spl1-SPL010036E04.5

Sequence:


               
               GGGTCCCAAGGCTCCTGGCAGCTCAGGGGTACAGCGGAGCTGGGCCATAAGGTCCCCAGC
GTGGTCTTCTGGGTGGACCTGGAAAGCAGGTTTCCCTTTCCGTTTGCACAGCGGCCGGAG
AGGGCTCACTTGCCCTGCCCTGTCCGGACCTCCTTCTCTGACAGGCTGACACTGTTTGGC
TCCTGTCCCTGGCTCTCCTCCATGGCGGCTGGCAGACGGATGGTGCTCGCTGGCCTTTTC
GCGCCAATACTCCCCTAGGCCCACTCCGAGCACAGCCGCCCCAGCACCTGACAGTCCACG
GAAAGAGGCAGAACCCGGGCCTCCGCCGGTGCCAACCAATCAGCAGAACCCCCGCCTTCC
CCGGCCCGCCCCCGCCCCTGCGGAGCAAGGTCACAGCATCTGCGGCGGAAATCACGGGAC
GGCTTCCTGCTGGCTCAGCCGGGAGGCCGAGGCGCGGCCGGCCGTTGGGCCAAAAACTGT
TTATCTGAATCCTGAAACACCCGCGGCGACAGCTGCTCCTTGCGCTCTCCGGCCTGGGTC
ACACCTCGGGGATGAAGGCCGCGTCGGGGCGGGCCCTGCTCCACGTGGCCCTGGCCAGCT
GCCTGTGCGTGGCCGCCGTCCGCAGCGGTGTTTTCGACAGTGTCTTCGTCCAAGTGGGCC
GCGAGCACTACGCCGAAGCCCCGCTCGCCGGCCTCCCCGCTTTCCTGGCCATGCCCTTCA
ACTCACTCGTTAACTTGGCCTACGTGCTCCTGGGCGCCTACTGGCTCCAGAGCGAGGCCA
GCGCCCCCGGGGGCCCCGCCGAGGTGCAGAGGGCACGCTACCTCAAGGATGTCTTCGCCG
GCATGGCCCTGGTCTACGGCCCGGTCCAGTGGCTGCGGATCGCGACGCAGACGCGGGCCG
CCGCCGTGCTGGACCAGTGGCTCACCTTGCCCATCTTCGCGTGGCCCGTGGCCTGGTGCC
TCTGCCTGGACTGGGGCTGGAAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGTCCCAAGGCTCCTGGCAGCTCAGGGGTACAGCGGAGCTGGGCCATAAGGTCCCCAGC
GTGGTCTTCTGGGTGGACCTGGAAAGCAGGTTTCCCTTTCCGTTTGCACAGCGGCCGGAG
AGGGCTCACTTGCCCTGCCCTGTCCGGACCTCCTTCTCTGACAGGCTGACACTGTTTGGC
TCCTGTCCCTGGCTCTCCTCCATGGCGGCTGGCAGACGGATGGTGCTCGCTGGCCTTTTC
GCGCCAATACTCCCCTAGGCCCACTCCGAGCACAGCCGCCCCAGCACCTGACAGTCCACG
GAAAGAGGCAGAACCCGGGCCTCCGCCGGTGCCAACCAATCAGCAGAACCCCCGCCTTCC
CCGGCCCGCCCCCGCCCCTGCGGAGCAAGGTCACAGCATCTGCGGCGGAAATCACGGGAC
GGCTTCCTGCTGGCTCAGCCGGGAGGCCGAGGCGCGGCCGGCCGTTGGGCCAAAAACTGT
TTATCTGAATCCTGAAACACCCGCGGCGACAGCTGCTCCTTGCGCTCTCCGGCCTGGGTC
ACACCTCGGGGATGAAGGCCGCGTCGGGGCGGGCCCTGCTCCACGTGGCCCTGGCCAGCT
GCCTGTGCGTGGCCGCCGTCCGCAGCGGTGTTTTCGACAGTGTCTTCGTCCAAGTGGGCC
GCGAGCACTACGCCGAAGCCCCGCTCGCCGGCCTCCCCGCTTTCCTGGCCATGCCCTTCA
ACTCACTCGTTAACTTGGCCTACGTGCTCCTGGGCGCCTACTGGCTCCAGAGCGAGGCCA
GCGCCCCCGGGGGCCCCGCCGAGGTGCAGAGGGCACGCTACCTCAAGGATGTCTTCGCCG
GCATGGCCCTGGTCTACGGCCCGGTCCAGTGGCTGCGGATCGCGACGCAGACGCGGGCCG
CCGCCGTGCTGGACCAGTGGCTCACCTTGCCCATCTTCGCGTGGCCCGTGGCCTGGTGCC
TCTGCCTGGACTGGGGCTGGAAGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               ITBA1_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               ITBA1_HUMAN

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               300-984, gnl|bosTau2|chr7 (6367761-6368452)
               

               
               300-984, gnl|Hg17|chrX (152768147-152768775)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               300-984, gnl|bosTau2|chr7 (6367761-6368452)
               

               
               300-984, gnl|Hg17|chrX (152768147-152768775)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	300-984, gnl\|bosTau2\|chr7 (6367761-6368452)
	300-984, gnl\|Hg17\|chrX (152768147-152768775)