Ss1.1-Spl1-SPL010039G11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCCGCCCCTCTCAAGATGGCGCTGCACTCAATGCGGAAGGCGCGTGAGTGCTGGAACCTC ATCCGGGCACTTCATCAAGGACCCGAAGCTGCTCTCGCTCCCCAGAAAGATGCCGTGAAG CGAGTATTCTCTGGCATTCAGCCTACAGGAATCCCCCACCTGGGCAATTACCTGGGAGCC ATTGAGAGCTGGGTGAAATTACAGGATGAGCATGGCTCCGTGCTTTACAGCATCGCTGAC CTACACTCCATCACTGTACCCCAAGACCCAGCCGTCCTCCGACAGAGCATCTTGGACATG ACTGCGGTTCTTCTTGCCTGTGGCATAAACCCAGAGAAGAGCATCCTTTTCCAACAATCT CAGGTGTCTGAACACACGCAATTAAGTTGGATCCTTACCTGCATGATCAGACTGCCCCGA TTACAACATTTACACCAGTGGAAGGCAAAGACTGATAAGGAGAAGCAGGATGGAACCATG GGGCTGCTCACGTACCCAGTGCTCCAGGCAGCTGACATTCTGCTGTACAAGTCCACACAT GTTCCTGTTGGGGAGGATCAAGTCCAGCACATGGAGCTAGTTCAAGATCTAGCACAAAGG TTTAACAAGAAGTATGGGGAGTTCTTCCCAGTGCCCAAGTCCATTCTGACATCAATGAAG AAGGTAAAATCCCTGCGTGATCCCTCTGCCAAGATGTCGAAATCAGACCCGGATAAACTA GCTGCTGTCAGAATAACAGACAGCCCGGAGGAGATCGTGCAGAAGTTCCGCAAGGCTGTG ACGGACTTCACCTCGGAGGTCACCTACGACCCGGCCAGGCGAGGAGGCGTGTCCAACTTG GTGGCCATCCACGCGGCAGTGACCGGACTCCCGGTGGAGGAGGTGGTCCGCCGAAGTGCT GGCATCAACACCGCTGGCTACAAGTTGGTGGTGGCGGAGGCTGTGATTGAGAGATTTGCA CCAATTAAGAGTGAAATTGAAAAACTGAAGAGGAACAAGGACCACCTAGAGAAGGTTTTA CAAGTTGGGTCGGCAAAAGCCAAAGAATTAGCATATCCCGTGTGCCAGGAGGTGAAGAAA TTGGTGGGGTTTCTATAGGCAGTCTCACCTAGTCCCAGAAAATGTTTTTTATCTTGTGGT CTGCTTGCACACTCAGTCTAATAAAGGCAGCTTTCCTAAGACGCCAACAATTCCAGTTTG GGGATGCTTAGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCCGCCCCTCTCAAGATGGCGCTGCACTCAATGCGGAAGGCGCGTGAGTGCTGGAACCTC ATCCGGGCACTTCATCAAGGACCCGAAGCTGCTCTCGCTCCCCAGAAAGATGCCGTGAAG CGAGTATTCTCTGGCATTCAGCCTACAGGAATCCCCCACCTGGGCAATTACCTGGGAGCC ATTGAGAGCTGGGTGAAATTACAGGATGAGCATGGCTCCGTGCTTTACAGCATCGCTGAC CTACACTCCATCACTGTACCCCAAGACCCAGCCGTCCTCCGACAGAGCATCTTGGACATG ACTGCGGTTCTTCTTGCCTGTGGCATAAACCCAGAGAAGAGCATCCTTTTCCAACAATCT CAGGTGTCTGAACACACGCAATTAAGTTGGATCCTTACCTGCATGATCAGACTGCCCCGA TTACAACATTTACACCAGTGGAAGGCAAAGACTGATAAGGAGAAGCAGGATGGAACCATG GGGCTGCTCACGTACCCAGTGCTCCAGGCAGCTGACATTCTGCTGTACAAGTCCACACAT GTTCCTGTTGGGGAGGATCAAGTCCAGCACATGGAGCTAGTTCAAGATCTAGCACAAAGG TTTAACAAGAAGTATGGGGAGTTCTTCCCAGTGCCCAAGTCCATTCTGACATCAATGAAG AAGGTAAAATCCCTGCGTGATCCCTCTGCCAAGATGTCGAAATCAGACCCGGATAAACTA GCTGCTGTCAGAATAACAGACAGCCCGGAGGAGATCGTGCAGAAGTTCCGCAAGGCTGTG ACGGACTTCACCTCGGAGGTCACCTACGACCCGGCCAGGCGAGGAGGCGTGTCCAACTTG GTGGCCATCCACGCGGCAGTGACCGGACTCCCGGTGGAGGAGGTGGTCCGCCGAAGTGCT GGCATCAACACCGCTGGCTACAAGTTGGTGGTGGCGGAGGCTGTGATTGAGAGATTTGCA CCAATTAAGAGTGAAATTGAAAAACTGAAGAGGAACAAGGACCACCTAGAGAAGGTTTTA CAAGTTGGGTCGGCAAAAGCCAAAGAATTAGCATATCCCGTGTGCCAGGAGGTGAAGAAA TTGGTGGGGTTTCTATAGGCAGTCTCACCTAGTCCCAGAAAATGTTTTTTATCTTGTGGT CTGCTTGCACACTCAGTCTAATAAAGGCAGCTTTCCTAAGACGCCAACAATTCCAGTTTG GGGATGCTTAGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 102-365, gnl|bosTau2|chr3 (20557518-20557781) | |
| 102-365, gnl|Hg17|chr1 (119331276-119331013) | |
| 102-365, gnl|Mm7|chr3 (98982912-98983175) | |
| 526-649, gnl|bosTau2|chr3 (20604808-20604931) | |
| 526-649, gnl|canFam2|chr17 (59304955-59305089) | |
| 526-649, gnl|danRer3|chr9 (14581972-14582099) | |
| 526-649, gnl|dasNov1|scaffold_1725 (84164-84298) | |
| 526-649, gnl|echTel1|scaffold_222434 (3453-3587) | |
| 526-649, gnl|fr1|chrUn (78284962-78285091) | |
| 526-649, gnl|galGal2|chr1 (72623893-72623760) | |
| 526-649, gnl|hg17|chr1 (119288754-119288888) | |
| 526-649, gnl|Hg17|chr1 (119288883-119288760) | |
| 526-649, gnl|loxAfr1|scaffold_57244 (11848-11982) | |
| 526-649, gnl|mm7|chr3 (99010217-99010083) | |
| 526-649, gnl|Mm7|chr3 (99010086-99010209) | |
| 526-649, gnl|monDom2|scaffold_82 (5727314-5727449) | |
| 526-649, gnl|oryCun1|scaffold_181446 (14906-14772) | |
| 526-649, gnl|panTro1|chr1 (119141467-119141601) | |
| 526-649, gnl|rheMac2|chr1 (121941576-121941710) | |
| 526-649, gnl|rn3|chr2 (193862307-193862173) | |
| 526-649, gnl|tetNig1|chr2 (17563587-17563719) | |
| 799-1210, gnl|bosTau2|chr19 (39276553-39276935) | |
| 799-1210, gnl|Hg17|chr1 (119287875-119287473) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 102-365, gnl|bosTau2|chr3 (20557518-20557781) | |
| 102-365, gnl|Hg17|chr1 (119331276-119331013) | |
| 102-365, gnl|Mm7|chr3 (98982912-98983175) | |
| 526-649, gnl|bosTau2|chr3 (20604808-20604931) | |
| 526-649, gnl|canFam2|chr17 (59304955-59305089) | |
| 526-649, gnl|danRer3|chr9 (14581972-14582099) | |
| 526-649, gnl|dasNov1|scaffold_1725 (84164-84298) | |
| 526-649, gnl|echTel1|scaffold_222434 (3453-3587) | |
| 526-649, gnl|fr1|chrUn (78284962-78285091) | |
| 526-649, gnl|galGal2|chr1 (72623893-72623760) | |
| 526-649, gnl|hg17|chr1 (119288754-119288888) | |
| 526-649, gnl|Hg17|chr1 (119288883-119288760) | |
| 526-649, gnl|loxAfr1|scaffold_57244 (11848-11982) | |
| 526-649, gnl|mm7|chr3 (99010217-99010083) | |
| 526-649, gnl|Mm7|chr3 (99010086-99010209) | |
| 526-649, gnl|monDom2|scaffold_82 (5727314-5727449) | |
| 526-649, gnl|oryCun1|scaffold_181446 (14906-14772) | |
| 526-649, gnl|panTro1|chr1 (119141467-119141601) | |
| 526-649, gnl|rheMac2|chr1 (121941576-121941710) | |
| 526-649, gnl|rn3|chr2 (193862307-193862173) | |
| 526-649, gnl|tetNig1|chr2 (17563587-17563719) | |
| 799-1210, gnl|bosTau2|chr19 (39276553-39276935) | |
| 799-1210, gnl|Hg17|chr1 (119287875-119287473) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| cte (0.29274) | |
| clu (0.239292) | |
| sin (0.174948) | |
| csk (0.140746) | |
| cst (0.140036) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (0.29274) | |
| clu (0.239292) | |
| sin (0.174948) | |
| csk (0.140746) | |
| cst (0.140036) |