Ss1.1-Spl1-SPL01A060056.5
|
CTCTCACGTCAGCTTTGCTTAATGAAACTCTTCTTCCCACTGAATATGCTTTCTCTCTTC
AGCAGCTCTCTGGTCCCTGCGTCACTTCCTGTGTTCTGCCTGCTGGTCTTCGTATGTGGG
TTTTTGTACTCGTGTCTTTCTTAGATTGTAAGCTCCACGCGGGCAGAGATTGAGTCTTCC
CCATCCGTTCTCCCTTTTGGTCACAATCTCCCAATTTTCCTTTGGGGGACAACCCCTTTT
CCCATTGGCTCTCTGTGGTTTTGGGGAGATGGTCAATCAGAGTATCTTGCCAAGAGGATG
CTCTTCCCCTGGAACTTGAACTTTGAGTCATGGGCTGCAAGGACTGGCAGTGATTGGCGC
TGATCCACCCTGGCCAAGGTGCTCGGAAGAAGCCACTCATTAGTTCCTGCCTCCCAGATC
CCTGGAGCTGCCCCGGTCCCTGAGCTCCCGAGGCCTGCTGCTTCAGATTTTCCTTCGTAT
CTGTGAGCTATATCTCATATCCTTACAATAAATGTGTTTCTCTCTCGCCCTCTCTTTTTT
TTTTTTTTTTTTTTAAAGTGAGCTTAAAAAAGTTGTTGTTGCTTTTAGCCAAAGATCCCC
TACCTATCATAGAGCTGTTAGGATTGGAACTGACCAGACTTAATCACTCTAGTTCTTTTG
CAGACTCTGATGGGGTTTTTTTTCTCTCCTTTTTTTTTTTTTTTCCCCTAAACAATTTAA
AAAATCAGCCTGAGACCGCTGCTGCTTTGAAGCGTACGCTGGAAGCCCTGATGGACCGAG
GGGCTGTATTGAGGAACTTGGAGAACCTGGGCGAGCGCATGCTTCCCT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTCTCACGTCAGCTTTGCTTAATGAAACTCTTCTTCCCACTGAATATGCTTTCTCTCTTC
AGCAGCTCTCTGGTCCCTGCGTCACTTCCTGTGTTCTGCCTGCTGGTCTTCGTATGTGGG
TTTTTGTACTCGTGTCTTTCTTAGATTGTAAGCTCCACGCGGGCAGAGATTGAGTCTTCC
CCATCCGTTCTCCCTTTTGGTCACAATCTCCCAATTTTCCTTTGGGGGACAACCCCTTTT
CCCATTGGCTCTCTGTGGTTTTGGGGAGATGGTCAATCAGAGTATCTTGCCAAGAGGATG
CTCTTCCCCTGGAACTTGAACTTTGAGTCATGGGCTGCAAGGACTGGCAGTGATTGGCGC
TGATCCACCCTGGCCAAGGTGCTCGGAAGAAGCCACTCATTAGTTCCTGCCTCCCAGATC
CCTGGAGCTGCCCCGGTCCCTGAGCTCCCGAGGCCTGCTGCTTCAGATTTTCCTTCGTAT
CTGTGAGCTATATCTCATATCCTTACAATAAATGTGTTTCTCTCTCGCCCTCTCTTTTTT
TTTTTTTTTTTTTTAAAGTGAGCTTAAAAAAGTTGTTGTTGCTTTTAGCCAAAGATCCCC
TACCTATCATAGAGCTGTTAGGATTGGAACTGACCAGACTTAATCACTCTAGTTCTTTTG
CAGACTCTGATGGGGTTTTTTTTCTCTCCTTTTTTTTTTTTTTTCCCCTAAACAATTTAA
AAAATCAGCCTGAGACCGCTGCTGCTTTGAAGCGTACGCTGGAAGCCCTGATGGACCGAG
GGGCTGTATTGAGGAACTTGGAGAACCTGGGCGAGCGCATGCTTCCCT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
150-327, CJ018021 full-length enriched swine cDNA library, adult spleen Sus
(dbj|CJ018021.1|), blast E-value=0, identity=100% |
PigEST conread start position and end position of sequence similarity to another annotated EST (NCBI dbEST),
transcript identifier and annotation,
blast E-value,
PigEST conread identity to the similar transcript
|
150-327, CJ018021 full-length enriched swine cDNA library, adult spleen Sus
(dbj|CJ018021.1|), blast E-value=0, identity=100% |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
