Non-Coding RNA Search

Ss1.1-Spl1-SPL01A060097.5

Sequence:


               
               GTCGGCAGTCGGGCTGAGGACATGTGGGCGACGCTCAGGGGGCTGGGGGTCCCACACGCT
AGGCTCCTGGGCGGCGCCCAAGGCCTGCACACCTCGCCAGTGTCCTATGGCAAGAACCTG
CTTAAGAAATTTGCTTCGAAAACCAAGAAGAAGTTTTGGTATGAAGGTCCTTCCTTAGGC
TCTCACTTGACTTACAAGCCGTCACAGTTGGAATTCCTAACGAAGAGTACATCCAAAACG
ACCAGGAAGGAAGATCACGTGCGCCTGAGGGCCCTTAACGGACTCCTTCACAAAGCGCTG
ACCGACATGCTGTGTACCCCTGAAGTGAGCCAGGAGATCTGCGACCTGAATGTGGAGCTC
TCTAAGGTCTCTCTGACTACAGACTTTTCTGCCTGCCGAGTGTTCTGGAGGGCGACACTC
TCTGAGGCTCAGAACGCACACACGGAGGCCGTCCTGCAGAGGAGTGCTGCGCACATGAGG
CATCTTTTGATGTCCCAGCAGACTCTGAGGAGCATGCCGCCAATAGTGTTTGTTCAGGAC
AAAAAACATGCAGCTGCAGTGGAGGTTGATCAGTTATTGGCAATTGCTGATTTGGGACCC
GTAGATGAAAAAGACAACTTTACACAAAATGATTTCAGGAACCCTGAGGCCCCTGACACC
ATGTCGCCATGTGACAGCTCTGGCCCTGCCATGCACTCGAGTCTATATGGGATTGATCAC
GAGGCGCTCAACAAGCAGATTGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCGGCAGTCGGGCTGAGGACATGTGGGCGACGCTCAGGGGGCTGGGGGTCCCACACGCT
AGGCTCCTGGGCGGCGCCCAAGGCCTGCACACCTCGCCAGTGTCCTATGGCAAGAACCTG
CTTAAGAAATTTGCTTCGAAAACCAAGAAGAAGTTTTGGTATGAAGGTCCTTCCTTAGGC
TCTCACTTGACTTACAAGCCGTCACAGTTGGAATTCCTAACGAAGAGTACATCCAAAACG
ACCAGGAAGGAAGATCACGTGCGCCTGAGGGCCCTTAACGGACTCCTTCACAAAGCGCTG
ACCGACATGCTGTGTACCCCTGAAGTGAGCCAGGAGATCTGCGACCTGAATGTGGAGCTC
TCTAAGGTCTCTCTGACTACAGACTTTTCTGCCTGCCGAGTGTTCTGGAGGGCGACACTC
TCTGAGGCTCAGAACGCACACACGGAGGCCGTCCTGCAGAGGAGTGCTGCGCACATGAGG
CATCTTTTGATGTCCCAGCAGACTCTGAGGAGCATGCCGCCAATAGTGTTTGTTCAGGAC
AAAAAACATGCAGCTGCAGTGGAGGTTGATCAGTTATTGGCAATTGCTGATTTGGGACCC
GTAGATGAAAAAGACAACTTTACACAAAATGATTTCAGGAACCCTGAGGCCCCTGACACC
ATGTCGCCATGTGACAGCTCTGGCCCTGCCATGCACTCGAGTCTATATGGGATTGATCAC
GAGGCGCTCAACAAGCAGATTGTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|57031517|ref|XP_533362.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|57031517|ref|XP_533362.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               147-740, gnl|bosTau2|chr23 (26751409-26750821)
               

               
               147-740, gnl|Hg17|chr15 (57047132-57046552)
               

               
               147-740, gnl|Mm7|chr18 (80484226-80479133)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               147-740, gnl|bosTau2|chr23 (26751409-26750821)
               

               
               147-740, gnl|Hg17|chr15 (57047132-57046552)
               

               
               147-740, gnl|Mm7|chr18 (80484226-80479133)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fli (0.202881)
               

               
               ese (0.126502)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fli (0.202881)
               

               
               ese (0.126502)

	147-740, gnl\|bosTau2\|chr23 (26751409-26750821)
	147-740, gnl\|Hg17\|chr15 (57047132-57046552)
	147-740, gnl\|Mm7\|chr18 (80484226-80479133)