Ss1.1-Spl1-SPL01B010059.5
|
GTTTCTGTTGGAGGGCCAGCAAGAGGGCGTCCAAGAGGAGTTATTTCCACTCCAGTGATC
AGAACATTTGGAAGAGGTGGAAGGTACTATGGCAGAGGCTATAAAAACCAGGGTGCGATT
CAGGGCAAGCCTCCCTATGCTGCTTCAGCAGAAGAAGTGGCCAAAGAACTGAAGTCGAGA
TCCGGAGAGTCTAAATCCTCCGCTGTGTCTTCAGACGGGTCCCTGGCCGAGAACGGAGCA
GTGGCTGAGGAGAAGCCAGCTCCCCAGATGAATGGGAGCACGGGCGACGCCAGGGCCCCC
AGCCACTCGGAAAGTGCCTTGAACAATGACTCTAAGACGTGCAATACAAATCCTCACTTA
AATGCACTAAGTACAGACAGTGCTTGCCGTAGAGCTGATGCTCTGGAGGCAGCTGTCTTA
AAGAAAGAAGAGTAAACTTATTTTTTATAGAGGGTGAAGGATGCTGGAAGGGTAAGGATT
AGGAATATCTGGAGAGAAAGAGAGCCTACAGTTATGTACATTTTTTCCTTTCCGTAAGAG
AAAAATGAGGACTTTGGAAATTCGGATCCCTCTTTGATATCAGAGATTTAAACAACACAT
TTTTAGTTTTAACCAGTTGTAGTCAAAATGCTACAATAAAACAAAAAGAGAGAAAGAAAA
TGAAGAGCATTTGACTCCCACACTTAAAATGAAGTACACACAAAGTTTAAACTGGTTATG
ACAAAAGCCTATAGTTGTGTTTCTTGAACTTATAAAGAAAACAAATTTTGGCAGTCTTTA
AGTATATATAGCTTAAAATATCATTTTTAGCATTTGGCACCATATGTATGCCATTATCTT
TGATTTTTGCATTACTGTTCACAAGAAAGCTTTGTCTAAGGCTTTGATTTTATGATTATG
AAAGAAATAAGGCACAACCACAGTTTTTCTTTCTTACTTAAATTTCATCACTGTTGATGT
GGTTCTTTTGTGTTTAAAAAAAAAAAGTGCAACTATCAAAACTAAAAAAATTATAGAGTA
ATATTGCCGTTCTGCTGATTTTAAATATACAGTACATCATACATACTTTACAAGCAAGTT
AATGGAGATAAAGTTGAAATCATAGAAGATGCAAATGACCTTTCAAAATCAACACAATGT
GTTCTGAAACTTTTCGTGACTTAATACCATGCATCTGTGATCAATGAACTATGTGGTTTT
GAATCGGATGTAGACCATTAGTGCTACTACTTGAGCTAAACTTCTGCATGGTTCATAATT
TTTAAAGTGTGTAGTTAATATTATGCATGTTATTGTCCTTTCTTCCATTCTTACCAGTAT
GTGCCCATTTGCAAAACAAAAATGCAGATAATCAGTAATAGTCCTATAAAAGATGTTAAC
TCTGTTTAGTCATTGACTGATCTTGCTCTAACCTTAAAATTTCGTGATTATTGACCTCTG
TTGCATTTATTCTAAAACCCCCCAAAATTATCTAGCTGTTTCGAATATCAACATTACCCT
GGTGTACTCACTGCTGTATGCATTATTGTTCTTTGTTGCTGTTTTATGCCTTCATATTAG
CAAAATATGAAATTCTGTGAAAAACAAAAAAAAAAAAATCCCTTTGATCTTTAAAAAAAA
AAAAACAAAAAAAACAACCCCCCCTTCTGTAGCAGGAAACAAATTGCTTGTTCTTGAGAA
CTTTCCCATCAAGAATTTAGTAGAAGCAGGTATACTTATATCATTTTGATGTTTTTGTTA
ATGTTTCCAAACAATGTACTTTGAAATCAGAATCACTTCTTATTCGTTTTCATATAATTC
TCCTGATGCTCTTCATCACACATTAGTGATCAGAAATGAGATGTAATTCCCCAATCCCTG
CCCGCAAGACCTGAGTAGGATCTTTACTGTAAGTTGAAGGGAGTTTTGCCCTAACTCATG
GATTGTGCAAGAATGAACTGCTGTTGGGTTTGACTGATTGTAGATGGGTTGTGGTGTGGT
GTATCTGAAGGCTATTGAATGCAACTTACAATGCTTAATAAAAATCTTTATTCTTTTAGT |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GTTTCTGTTGGAGGGCCAGCAAGAGGGCGTCCAAGAGGAGTTATTTCCACTCCAGTGATC
AGAACATTTGGAAGAGGTGGAAGGTACTATGGCAGAGGCTATAAAAACCAGGGTGCGATT
CAGGGCAAGCCTCCCTATGCTGCTTCAGCAGAAGAAGTGGCCAAAGAACTGAAGTCGAGA
TCCGGAGAGTCTAAATCCTCCGCTGTGTCTTCAGACGGGTCCCTGGCCGAGAACGGAGCA
GTGGCTGAGGAGAAGCCAGCTCCCCAGATGAATGGGAGCACGGGCGACGCCAGGGCCCCC
AGCCACTCGGAAAGTGCCTTGAACAATGACTCTAAGACGTGCAATACAAATCCTCACTTA
AATGCACTAAGTACAGACAGTGCTTGCCGTAGAGCTGATGCTCTGGAGGCAGCTGTCTTA
AAGAAAGAAGAGTAAACTTATTTTTTATAGAGGGTGAAGGATGCTGGAAGGGTAAGGATT
AGGAATATCTGGAGAGAAAGAGAGCCTACAGTTATGTACATTTTTTCCTTTCCGTAAGAG
AAAAATGAGGACTTTGGAAATTCGGATCCCTCTTTGATATCAGAGATTTAAACAACACAT
TTTTAGTTTTAACCAGTTGTAGTCAAAATGCTACAATAAAACAAAAAGAGAGAAAGAAAA
TGAAGAGCATTTGACTCCCACACTTAAAATGAAGTACACACAAAGTTTAAACTGGTTATG
ACAAAAGCCTATAGTTGTGTTTCTTGAACTTATAAAGAAAACAAATTTTGGCAGTCTTTA
AGTATATATAGCTTAAAATATCATTTTTAGCATTTGGCACCATATGTATGCCATTATCTT
TGATTTTTGCATTACTGTTCACAAGAAAGCTTTGTCTAAGGCTTTGATTTTATGATTATG
AAAGAAATAAGGCACAACCACAGTTTTTCTTTCTTACTTAAATTTCATCACTGTTGATGT
GGTTCTTTTGTGTTTAAAAAAAAAAAGTGCAACTATCAAAACTAAAAAAATTATAGAGTA
ATATTGCCGTTCTGCTGATTTTAAATATACAGTACATCATACATACTTTACAAGCAAGTT
AATGGAGATAAAGTTGAAATCATAGAAGATGCAAATGACCTTTCAAAATCAACACAATGT
GTTCTGAAACTTTTCGTGACTTAATACCATGCATCTGTGATCAATGAACTATGTGGTTTT
GAATCGGATGTAGACCATTAGTGCTACTACTTGAGCTAAACTTCTGCATGGTTCATAATT
TTTAAAGTGTGTAGTTAATATTATGCATGTTATTGTCCTTTCTTCCATTCTTACCAGTAT
GTGCCCATTTGCAAAACAAAAATGCAGATAATCAGTAATAGTCCTATAAAAGATGTTAAC
TCTGTTTAGTCATTGACTGATCTTGCTCTAACCTTAAAATTTCGTGATTATTGACCTCTG
TTGCATTTATTCTAAAACCCCCCAAAATTATCTAGCTGTTTCGAATATCAACATTACCCT
GGTGTACTCACTGCTGTATGCATTATTGTTCTTTGTTGCTGTTTTATGCCTTCATATTAG
CAAAATATGAAATTCTGTGAAAAACAAAAAAAAAAAAATCCCTTTGATCTTTAAAAAAAA
AAAAACAAAAAAAACAACCCCCCCTTCTGTAGCAGGAAACAAATTGCTTGTTCTTGAGAA
CTTTCCCATCAAGAATTTAGTAGAAGCAGGTATACTTATATCATTTTGATGTTTTTGTTA
ATGTTTCCAAACAATGTACTTTGAAATCAGAATCACTTCTTATTCGTTTTCATATAATTC
TCCTGATGCTCTTCATCACACATTAGTGATCAGAAATGAGATGTAATTCCCCAATCCCTG
CCCGCAAGACCTGAGTAGGATCTTTACTGTAAGTTGAAGGGAGTTTTGCCCTAACTCATG
GATTGTGCAAGAATGAACTGCTGTTGGGTTTGACTGATTGTAGATGGGTTGTGGTGTGGT
GTATCTGAAGGCTATTGAATGCAACTTACAATGCTTAATAAAAATCTTTATTCTTTTAGT |
|
gi|32484375|gb|AAH54362.1| |
Protein identifier
|
gi|32484375|gb|AAH54362.1| |
|
1365-1584, gnl|bosTau2|chrX (1682290-1682076) |
|
1365-1584, gnl|canFam2|chrX (95374594-95374910) |
|
1365-1584, gnl|danRer3|chr11 (28743979-28744301) |
|
1365-1584, gnl|dasNov1|scaffold_188630 (9-332) |
|
1365-1584, gnl|echTel1|scaffold_318147 (109948-110294) |
|
1365-1584, gnl|galGal2|chr12 (6445360-6445701) |
|
1365-1584, gnl|hg17|chrX (119233662-119233983) |
|
1365-1584, gnl|Hg17|chrX (119233961-119233745) |
|
1365-1584, gnl|loxAfr1|scaffold_7306 (63846-64159) |
|
1365-1584, gnl|mm7|chrX (33350308-33350639) |
|
1365-1584, gnl|Mm7|chrX (33350622-33350392) |
|
1365-1584, gnl|monDom2|scaffold_5 (51414758-51415078) |
|
1365-1584, gnl|oryCun1|scaffold_175730 (132458-132774) |
|
1365-1584, gnl|panTro1|chrX (123283307-123283628) |
|
1365-1584, gnl|rheMac2|chrX (118530851-118531165) |
|
1365-1584, gnl|rn3|chrX (7098571-7098243) |
| |
|
1705-2040, gnl|bosTau2|chr10 (69756570-69756237) |
|
1705-2040, gnl|Hg17|chr9 (93407616-93407944) |
|
1705-2040, gnl|Mm7|chr13 (48362802-48362479) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1365-1584, gnl|bosTau2|chrX (1682290-1682076) |
|
1365-1584, gnl|canFam2|chrX (95374594-95374910) |
|
1365-1584, gnl|danRer3|chr11 (28743979-28744301) |
|
1365-1584, gnl|dasNov1|scaffold_188630 (9-332) |
|
1365-1584, gnl|echTel1|scaffold_318147 (109948-110294) |
|
1365-1584, gnl|galGal2|chr12 (6445360-6445701) |
|
1365-1584, gnl|hg17|chrX (119233662-119233983) |
|
1365-1584, gnl|Hg17|chrX (119233961-119233745) |
|
1365-1584, gnl|loxAfr1|scaffold_7306 (63846-64159) |
|
1365-1584, gnl|mm7|chrX (33350308-33350639) |
|
1365-1584, gnl|Mm7|chrX (33350622-33350392) |
|
1365-1584, gnl|monDom2|scaffold_5 (51414758-51415078) |
|
1365-1584, gnl|oryCun1|scaffold_175730 (132458-132774) |
|
1365-1584, gnl|panTro1|chrX (123283307-123283628) |
|
1365-1584, gnl|rheMac2|chrX (118530851-118531165) |
|
1365-1584, gnl|rn3|chrX (7098571-7098243) |
| |
|
1705-2040, gnl|bosTau2|chr10 (69756570-69756237) |
|
1705-2040, gnl|Hg17|chr9 (93407616-93407944) |
|
1705-2040, gnl|Mm7|chr13 (48362802-48362479) |
|
sag (1.46172) |
|
cbe (1.43541) |
|
lin (1.16482) |
|
kid (0.778412) |
|
ret (0.7724) |
|
bfe (0.749288) |
|
mgp (0.692042) |
|
cte (0.58548) |
|
amn (0.417711) |
|
nca (0.410621) |
|
hea (0.408998) |
|
lyg (0.399308) |
|
elu (0.385356) |
|
sin (0.349895) |
|
eye (0.341006) |
|
cje (0.330469) |
|
nco (0.323468) |
|
mga (0.32041) |
|
sme (0.305437) |
|
lun (0.300978) |
|
jej (0.296765) |
|
liv (0.292569) |
|
spl (0.286369) |
|
lnt (0.284616) |
|
che (0.272628) |
|
tra (0.246184) |
|
tes (0.207814) |
|
ldo (0.194005) |
|
mgm (0.180343) |
|
fty (0.17584) |
|
ton (0.1755) |
|
fbs (0.175346) |
|
rec (0.17307) |
|
mcp (0.170648) |
|
cki (0.165235) |
|
fco (0.157208) |
|
cag (0.151194) |
|
isp (0.150376) |
|
hyp (0.142837) |
|
ste (0.135208) |
|
clu (0.119646) |
|
pgl (0.118483) |
|
cbl (0.114797) |
|
jca (0.11396) |
|
spc (0.113366) |
|
nbm (0.0993246) |
|
eje (0.0988338) |
|
sag (1.46172) |
|
cbe (1.43541) |
|
lin (1.16482) |
|
kid (0.778412) |
|
ret (0.7724) |
|
bfe (0.749288) |
|
mgp (0.692042) |
|
cte (0.58548) |
|
amn (0.417711) |
|
nca (0.410621) |
|
hea (0.408998) |
|
lyg (0.399308) |
|
elu (0.385356) |
|
sin (0.349895) |
|
eye (0.341006) |
|
cje (0.330469) |
|
nco (0.323468) |
|
mga (0.32041) |
|
sme (0.305437) |
|
lun (0.300978) |
|
jej (0.296765) |
|
liv (0.292569) |
|
spl (0.286369) |
|
lnt (0.284616) |
|
che (0.272628) |
|
tra (0.246184) |
|
tes (0.207814) |
|
ldo (0.194005) |
|
mgm (0.180343) |
|
fty (0.17584) |
|
ton (0.1755) |
|
fbs (0.175346) |
|
rec (0.17307) |
|
mcp (0.170648) |
|
cki (0.165235) |
|
fco (0.157208) |
|
cag (0.151194) |
|
isp (0.150376) |
|
hyp (0.142837) |
|
ste (0.135208) |
|
clu (0.119646) |
|
pgl (0.118483) |
|
cbl (0.114797) |
|
jca (0.11396) |
|
spc (0.113366) |
|
nbm (0.0993246) |
|
eje (0.0988338) |
