Non-Coding RNA Search

Ss1.1-Spl1-SPL01B020097.5

Sequence:


               
               CCTCATTCAGTGTCATTCAAATGCATCTAATGTCCTCTTTTGAAAAGGTGTATTGCATTT
CTTGCTCATCCTCCATTCATAATCCCTCCAGAAAAATAACTTAGTGTTCTGATGCCTTTC
ATACAGGGTAGGAATCAAGTGGGAACGGGGTTGGGTGGGGTGAATTAGGCAGTGGGGCGG
TGCTTATAAACCGACAGGGACAAGCACCTGAGGATTTGTGACATGTACTTCTGTGAGTTG
AAAGAATGCATAAACGGTGTTGGTGAAGACCACACAGATCTCTTACGTAGAATAGATATG
TAGTTCTGATCTCTGTGCATAGTTTGTTATTTTTTTCAGTCAAAATGATCTTGATGTGGA
AAGGCGTTTCTAGGAGAATGTAATTGGTAACTGACTCCCCCCATCATCCTTCGCCAAATA
TGACTGTATGAATTACAAGGGTATTGAGTGACTCTTTGTAAAATTATGTATGAATATCAG
AAATTCATTTATCCACAACCTAAAAGTTCACTTAAATTTCAGGACATCTGACTACGCTAA
AGAGACATTTCTGCTGGGACCGTCTTCTTGGTAACTCTGAAATTGTTTTTATAAGTTGTT
CTTTCCTCAGATTCGGTTTCTTCTGATGTGTTGTGGCTCATGGTAACTCACTACAGAAAA
GTGTGCTTATACTTCCTGTGACAATCATTTTGCTGACAGGGTGATGGTGTTTTAAAATAT
TGCACAGGAAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTCATTCAGTGTCATTCAAATGCATCTAATGTCCTCTTTTGAAAAGGTGTATTGCATTT
CTTGCTCATCCTCCATTCATAATCCCTCCAGAAAAATAACTTAGTGTTCTGATGCCTTTC
ATACAGGGTAGGAATCAAGTGGGAACGGGGTTGGGTGGGGTGAATTAGGCAGTGGGGCGG
TGCTTATAAACCGACAGGGACAAGCACCTGAGGATTTGTGACATGTACTTCTGTGAGTTG
AAAGAATGCATAAACGGTGTTGGTGAAGACCACACAGATCTCTTACGTAGAATAGATATG
TAGTTCTGATCTCTGTGCATAGTTTGTTATTTTTTTCAGTCAAAATGATCTTGATGTGGA
AAGGCGTTTCTAGGAGAATGTAATTGGTAACTGACTCCCCCCATCATCCTTCGCCAAATA
TGACTGTATGAATTACAAGGGTATTGAGTGACTCTTTGTAAAATTATGTATGAATATCAG
AAATTCATTTATCCACAACCTAAAAGTTCACTTAAATTTCAGGACATCTGACTACGCTAA
AGAGACATTTCTGCTGGGACCGTCTTCTTGGTAACTCTGAAATTGTTTTTATAAGTTGTT
CTTTCCTCAGATTCGGTTTCTTCTGATGTGTTGTGGCTCATGGTAACTCACTACAGAAAA
GTGTGCTTATACTTCCTGTGACAATCATTTTGCTGACAGGGTGATGGTGTTTTAAAATAT
TGCACAGGAAGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               173-732, gnl|bosTau2|chr6 (47291059-47290491)
               

               
               173-732, gnl|Hg17|chr4 (77439413-77438846)
               

               
               173-732, gnl|Mm7|chr5 (92430876-92430377)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               173-732, gnl|bosTau2|chr6 (47291059-47290491)
               

               
               173-732, gnl|Hg17|chr4 (77439413-77438846)
               

               
               173-732, gnl|Mm7|chr5 (92430876-92430377)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               mcp (0.170648)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)

	173-732, gnl\|bosTau2\|chr6 (47291059-47290491)
	173-732, gnl\|Hg17\|chr4 (77439413-77438846)
	173-732, gnl\|Mm7\|chr5 (92430876-92430377)