Non-Coding RNA Search

Ss1.1-Spl1-SPL01B040069.5

Sequence:


               
               GCAGCAGAACATTCAGGAAGGCCTGCAGTTTATACAGTCACCGCTGTCGTATCCAGGAAC
GCAGGAACAATATGCGGTGTATTTAGGTGCTCTCGTGAGAAATCTTTTTAACGAAGGGAA
TGATGTTTATCGGGAGCGTGACTGGAACAGCTCCGTAAGCCAGTATTCAGAAGCTTTGAG
TATAGCTGATTATGCAAAGTCTGAAGAAATTTTAATCCCTAAAGAAATCATTGAAAAACT
ACATATAAATCGTATTGCTTGCTATTCTATTATGGGCTTCCATGATAAAGTCTTAGAAGA
CTGCGAGACAGTTCTCAGTCTCAATGCCAGTAACTGCAAAGCTCTGTATCGGAAATCTAA
GGCTCTCAGCGATTTGGGAAGATACAAAGAGGCTTACGACGCTGTAGCGAAGTGCTCCTT
GGCGGTGCCTCAGGATGAACATGTAATAAAACTCACGCAAGAACTAGCTCAGAAATTGGG
ATTTAAAATAAGAAAAGCATATGTCAGAGCCGAGGTGAGCGGAAGTTCTCTCTGTAAGGT
ATTTCCATTTTGTTTCCCTTTTTCTTCCTTCCTTCCTTCCTTCCTTTCTTCTTTTCCTCT
TTTTCTTTCTTCCTTTCGTCCTTCTTTTCTCTCTGCTTTTTAGGGCCACACCTGCAGCAT
GTGGAAGTGCCCAGGCTAGGGGTCGAATTGGAGCTACAGCTGCCGGCCTACACCACAGCT
GCAGCCACGCCAGATCGAAGCTGCATCTCTGACAGACACCACAGCTCACTCCGCTGAGCC
AAATGGGAACTCCTCGGTTTGTTTTCTAACTTAGCGTCAGTTCTGGTTTTAAATTAGCAT
CTTAATTTTCTTTCAGCTCTCACTAAAATCAGTTCCTGGGGATGGGGCTGCCAAGGTAAG
GTTATAACTTCTGTAAGAATCATAATAAAAGAAAAAAAAAAAAGAAGAAGAGAGAGGCAT
TAGCAGTTCTGCTTTTAATATTTTTGGTTTGTGTCTATTTTTGAGACCTTTTTATTCTTC
AAACACATAAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGCAGAACATTCAGGAAGGCCTGCAGTTTATACAGTCACCGCTGTCGTATCCAGGAAC
GCAGGAACAATATGCGGTGTATTTAGGTGCTCTCGTGAGAAATCTTTTTAACGAAGGGAA
TGATGTTTATCGGGAGCGTGACTGGAACAGCTCCGTAAGCCAGTATTCAGAAGCTTTGAG
TATAGCTGATTATGCAAAGTCTGAAGAAATTTTAATCCCTAAAGAAATCATTGAAAAACT
ACATATAAATCGTATTGCTTGCTATTCTATTATGGGCTTCCATGATAAAGTCTTAGAAGA
CTGCGAGACAGTTCTCAGTCTCAATGCCAGTAACTGCAAAGCTCTGTATCGGAAATCTAA
GGCTCTCAGCGATTTGGGAAGATACAAAGAGGCTTACGACGCTGTAGCGAAGTGCTCCTT
GGCGGTGCCTCAGGATGAACATGTAATAAAACTCACGCAAGAACTAGCTCAGAAATTGGG
ATTTAAAATAAGAAAAGCATATGTCAGAGCCGAGGTGAGCGGAAGTTCTCTCTGTAAGGT
ATTTCCATTTTGTTTCCCTTTTTCTTCCTTCCTTCCTTCCTTCCTTTCTTCTTTTCCTCT
TTTTCTTTCTTCCTTTCGTCCTTCTTTTCTCTCTGCTTTTTAGGGCCACACCTGCAGCAT
GTGGAAGTGCCCAGGCTAGGGGTCGAATTGGAGCTACAGCTGCCGGCCTACACCACAGCT
GCAGCCACGCCAGATCGAAGCTGCATCTCTGACAGACACCACAGCTCACTCCGCTGAGCC
AAATGGGAACTCCTCGGTTTGTTTTCTAACTTAGCGTCAGTTCTGGTTTTAAATTAGCAT
CTTAATTTTCTTTCAGCTCTCACTAAAATCAGTTCCTGGGGATGGGGCTGCCAAGGTAAG
GTTATAACTTCTGTAAGAATCATAATAAAAGAAAAAAAAAAAAGAAGAAGAGAGAGGCAT
TAGCAGTTCTGCTTTTAATATTTTTGGTTTGTGTCTATTTTTGAGACCTTTTTATTCTTC
AAACACATAAGT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               76-275, gnl|bosTau2|chr25 (9780594-9780395)
               

               
               76-275, gnl|Hg17|chr16 (11780721-11780522)
               

               
               76-275, gnl|Mm7|chr16 (10840404-10840205)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               76-275, gnl|bosTau2|chr25 (9780594-9780395)
               

               
               76-275, gnl|Hg17|chr16 (11780721-11780522)
               

               
               76-275, gnl|Mm7|chr16 (10840404-10840205)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               pla (0.133672)
               

               
               thg (0.126791)
               

               
               ldo (0.0970026)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)
               

               
               thg (0.126791)
               

               
               ldo (0.0970026)

	76-275, gnl\|bosTau2\|chr25 (9780594-9780395)
	76-275, gnl\|Hg17\|chr16 (11780721-11780522)
	76-275, gnl\|Mm7\|chr16 (10840404-10840205)